Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASC4Q6P4E1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 MFAP1P1-201ENST00000442257 1255 ntBASIC18.81■□□□□ 0.6
CASC4Q6P4E1 AC098590.1-201ENST00000468126 897 ntBASIC18.81■□□□□ 0.6
CASC4Q6P4E1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 NUDT16P1-203ENST00000513809 620 ntBASIC18.81■□□□□ 0.6
CASC4Q6P4E1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 AL109659.2-201ENST00000606809 1674 ntBASIC18.81■□□□□ 0.6
CASC4Q6P4E1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.81■□□□□ 0.6
CASC4Q6P4E1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASC4Q6P4E1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 AC135776.1-201ENST00000319817 2481 ntBASIC18.8■□□□□ 0.6
CASC4Q6P4E1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 UBE2SP1-201ENST00000450587 669 ntBASIC18.8■□□□□ 0.6
CASC4Q6P4E1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 AP001412.1-201ENST00000608405 714 ntBASIC18.8■□□□□ 0.6
CASC4Q6P4E1 AC008622.2-201ENST00000617006 1229 ntBASIC18.8■□□□□ 0.6
CASC4Q6P4E1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 MYLKP1-201ENST00000509077 1580 ntBASIC18.8■□□□□ 0.6
CASC4Q6P4E1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.8■□□□□ 0.6
CASC4Q6P4E1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 RPS2P55-201ENST00000397318 883 ntBASIC18.79■□□□□ 0.6
CASC4Q6P4E1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 AC107956.1-201ENST00000494359 873 ntBASIC18.79■□□□□ 0.6
CASC4Q6P4E1 AC097488.1-201ENST00000507834 756 ntBASIC18.79■□□□□ 0.6
CASC4Q6P4E1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 DGCR10-201ENST00000609839 495 ntBASIC18.79■□□□□ 0.6
CASC4Q6P4E1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 AC096733.2-201ENST00000609937 1394 ntBASIC18.79■□□□□ 0.6
CASC4Q6P4E1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CASC4Q6P4E1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 GCSHP5-201ENST00000443090 522 ntBASIC18.78■□□□□ 0.6
CASC4Q6P4E1 MCCD1P1-208ENST00000445732 328 ntBASIC18.78■□□□□ 0.6
CASC4Q6P4E1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms