Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 FAM197Y3-203ENST00000618346 717 ntBASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AL499627.1-201ENST00000569373 2188 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 SDHAP2-201ENST00000455183 2001 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HTR5BP-201ENST00000430851 1154 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC009533.2-201ENST00000543664 586 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC009154.2-201ENST00000621177 724 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 MED15P5-201ENST00000423150 992 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 OR7E47P-204ENST00000575924 449 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 AL032819.2-201ENST00000624543 2162 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 AC021087.4-201ENST00000563761 564 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 AL691403.2-201ENST00000618460 490 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms