Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 FAM197Y3-203ENST00000618346 717 ntBASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AL499627.1-201ENST00000569373 2188 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 SDHAP2-201ENST00000455183 2001 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HTR5BP-201ENST00000430851 1154 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC009533.2-201ENST00000543664 586 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC009154.2-201ENST00000621177 724 ntBASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.34□□□□□ -0.43
VPS13DQ5THJ4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VPS13DQ5THJ4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 MED15P5-201ENST00000423150 992 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 OR7E47P-204ENST00000575924 449 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 AL032819.2-201ENST00000624543 2162 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 AC021087.4-201ENST00000563761 564 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 AL691403.2-201ENST00000618460 490 ntBASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.33□□□□□ -0.44
VPS13DQ5THJ4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms