Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.19■□□□□ 0.02
SRPXP78539 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.19■□□□□ 0.02
SRPXP78539 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.19■□□□□ 0.02
SRPXP78539 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.19■□□□□ 0.02
SRPXP78539 KRT18P41-201ENST00000518924 1277 ntBASIC15.19■□□□□ 0.02
SRPXP78539 AC008687.6-201ENST00000596318 630 ntBASIC15.19■□□□□ 0.02
SRPXP78539 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.19■□□□□ 0.02
SRPXP78539 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SRPXP78539 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SRPXP78539 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.19■□□□□ 0.02
SRPXP78539 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SRPXP78539 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.19■□□□□ 0.02
SRPXP78539 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SRPXP78539 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRPXP78539 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 HTR7P1-201ENST00000538670 1336 ntBASIC15.18■□□□□ 0.02
SRPXP78539 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SRPXP78539 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
SRPXP78539 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SRPXP78539 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 AP000593.1-201ENST00000393668 712 ntBASIC15.18■□□□□ 0.02
SRPXP78539 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.18■□□□□ 0.02
SRPXP78539 AC097658.1-201ENST00000475555 843 ntBASIC15.18■□□□□ 0.02
SRPXP78539 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.18■□□□□ 0.02
SRPXP78539 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.18■□□□□ 0.02
SRPXP78539 SOX15-203ENST00000570788 1093 ntBASIC15.18■□□□□ 0.02
SRPXP78539 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.18■□□□□ 0.02
SRPXP78539 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.18■□□□□ 0.02
SRPXP78539 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.18■□□□□ 0.02
SRPXP78539 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SRPXP78539 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
SRPXP78539 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.18■□□□□ 0.02
SRPXP78539 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRPXP78539 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.18■□□□□ 0.02
SRPXP78539 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.18■□□□□ 0.02
SRPXP78539 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.18■□□□□ 0.02
SRPXP78539 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.17■□□□□ 0.02
SRPXP78539 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SRPXP78539 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.17■□□□□ 0.02
SRPXP78539 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.17■□□□□ 0.02
SRPXP78539 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.17■□□□□ 0.02
SRPXP78539 GMCL1P1-201ENST00000463439 1581 ntBASIC15.17■□□□□ 0.02
SRPXP78539 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SRPXP78539 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.17■□□□□ 0.02
SRPXP78539 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.17■□□□□ 0.02
SRPXP78539 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.17■□□□□ 0.02
SRPXP78539 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.17■□□□□ 0.02
SRPXP78539 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.17■□□□□ 0.02
SRPXP78539 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.17■□□□□ 0.02
SRPXP78539 AL050303.2-201ENST00000619798 666 ntBASIC15.17■□□□□ 0.02
SRPXP78539 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.17■□□□□ 0.02
SRPXP78539 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SRPXP78539 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.17■□□□□ 0.02
SRPXP78539 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SRPXP78539 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.17■□□□□ 0.02
SRPXP78539 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.17■□□□□ 0.02
SRPXP78539 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.17■□□□□ 0.02
SRPXP78539 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRPXP78539 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SRPXP78539 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms