Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 Z85996.1-201ENST00000494644 937 ntBASIC19.15■□□□□ 0.66
IRX4P78413 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.15■□□□□ 0.66
IRX4P78413 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.15■□□□□ 0.66
IRX4P78413 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.15■□□□□ 0.66
IRX4P78413 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.15■□□□□ 0.66
IRX4P78413 AC069148.1-201ENST00000608741 768 ntBASIC19.15■□□□□ 0.66
IRX4P78413 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.15■□□□□ 0.66
IRX4P78413 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.15■□□□□ 0.66
IRX4P78413 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 AC005332.8-201ENST00000622750 2735 ntBASIC19.15■□□□□ 0.66
IRX4P78413 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IRX4P78413 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
IRX4P78413 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
IRX4P78413 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
IRX4P78413 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
IRX4P78413 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.14■□□□□ 0.65
IRX4P78413 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.14■□□□□ 0.65
IRX4P78413 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
IRX4P78413 KRT18P38-201ENST00000449496 1282 ntBASIC19.14■□□□□ 0.65
IRX4P78413 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
IRX4P78413 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.14■□□□□ 0.65
IRX4P78413 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.14■□□□□ 0.65
IRX4P78413 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.14■□□□□ 0.65
IRX4P78413 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.14■□□□□ 0.65
IRX4P78413 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.14■□□□□ 0.65
IRX4P78413 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
IRX4P78413 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.14■□□□□ 0.65
IRX4P78413 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
IRX4P78413 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
IRX4P78413 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.14■□□□□ 0.65
IRX4P78413 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.14■□□□□ 0.65
IRX4P78413 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.14■□□□□ 0.65
IRX4P78413 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
IRX4P78413 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
IRX4P78413 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.14■□□□□ 0.65
IRX4P78413 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IRX4P78413 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.14■□□□□ 0.65
IRX4P78413 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.13■□□□□ 0.65
IRX4P78413 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
IRX4P78413 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.13■□□□□ 0.65
IRX4P78413 FP475955.4-201ENST00000623131 1990 ntBASIC19.13■□□□□ 0.65
IRX4P78413 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
IRX4P78413 WIZP1-201ENST00000531444 2299 ntBASIC19.13■□□□□ 0.65
IRX4P78413 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
IRX4P78413 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
IRX4P78413 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.13■□□□□ 0.65
IRX4P78413 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
IRX4P78413 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.13■□□□□ 0.65
IRX4P78413 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.13■□□□□ 0.65
IRX4P78413 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.13■□□□□ 0.65
IRX4P78413 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.13■□□□□ 0.65
IRX4P78413 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
IRX4P78413 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.13■□□□□ 0.65
IRX4P78413 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.13■□□□□ 0.65
IRX4P78413 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
IRX4P78413 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IRX4P78413 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.13■□□□□ 0.65
IRX4P78413 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.12■□□□□ 0.65
IRX4P78413 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.12■□□□□ 0.65
IRX4P78413 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms