Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
PRAMEP78395 AP000593.1-201ENST00000393668 712 ntBASIC18.58■□□□□ 0.56
PRAMEP78395 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PRAMEP78395 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEP78395 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.58■□□□□ 0.56
PRAMEP78395 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEP78395 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEP78395 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEP78395 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEP78395 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PRAMEP78395 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.58■□□□□ 0.56
PRAMEP78395 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.58■□□□□ 0.56
PRAMEP78395 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PRAMEP78395 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PRAMEP78395 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEP78395 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PRAMEP78395 AC092338.2-201ENST00000568827 1415 ntBASIC18.57■□□□□ 0.56
PRAMEP78395 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PRAMEP78395 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PRAMEP78395 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.57■□□□□ 0.56
PRAMEP78395 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.57■□□□□ 0.56
PRAMEP78395 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PRAMEP78395 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.57■□□□□ 0.56
PRAMEP78395 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEP78395 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
PRAMEP78395 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PRAMEP78395 BICD1-207ENST00000551848 1962 ntBASIC18.56■□□□□ 0.56
PRAMEP78395 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PRAMEP78395 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 AC007663.1-201ENST00000438948 1240 ntBASIC18.56■□□□□ 0.56
PRAMEP78395 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 TSPY15P-201ENST00000457163 923 ntBASIC18.56■□□□□ 0.56
PRAMEP78395 AC128688.1-201ENST00000487626 519 ntBASIC18.56■□□□□ 0.56
PRAMEP78395 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEP78395 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.56■□□□□ 0.56
PRAMEP78395 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEP78395 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEP78395 NAPSB-206ENST00000562112 1266 ntBASIC18.56■□□□□ 0.56
PRAMEP78395 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.56■□□□□ 0.56
PRAMEP78395 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.56■□□□□ 0.56
PRAMEP78395 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.56■□□□□ 0.56
PRAMEP78395 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PRAMEP78395 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PRAMEP78395 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PRAMEP78395 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEP78395 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEP78395 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PRAMEP78395 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.56■□□□□ 0.56
PRAMEP78395 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEP78395 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRAMEP78395 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.55■□□□□ 0.56
PRAMEP78395 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.55■□□□□ 0.56
PRAMEP78395 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.55■□□□□ 0.56
PRAMEP78395 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.55■□□□□ 0.56
PRAMEP78395 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PRAMEP78395 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.55■□□□□ 0.56
PRAMEP78395 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.55■□□□□ 0.56
PRAMEP78395 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms