Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PHC1P78364 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.56■□□□□ 0.4
PHC1P78364 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.56■□□□□ 0.4
PHC1P78364 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHC1P78364 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PHC1P78364 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PHC1P78364 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PHC1P78364 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 AC116562.2-201ENST00000507042 360 ntBASIC17.55■□□□□ 0.4
PHC1P78364 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PHC1P78364 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.55■□□□□ 0.4
PHC1P78364 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PHC1P78364 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.55■□□□□ 0.4
PHC1P78364 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PHC1P78364 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHC1P78364 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.54■□□□□ 0.4
PHC1P78364 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PHC1P78364 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.54■□□□□ 0.4
PHC1P78364 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.54■□□□□ 0.4
PHC1P78364 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.54■□□□□ 0.4
PHC1P78364 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.54■□□□□ 0.4
PHC1P78364 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.54■□□□□ 0.4
PHC1P78364 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 FAM197Y4-202ENST00000622692 608 ntBASIC17.54■□□□□ 0.4
PHC1P78364 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PHC1P78364 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PHC1P78364 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.54■□□□□ 0.4
PHC1P78364 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHC1P78364 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.54■□□□□ 0.4
PHC1P78364 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PHC1P78364 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.53■□□□□ 0.4
PHC1P78364 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PHC1P78364 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PHC1P78364 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 PRORSD1P-201ENST00000295112 541 ntBASIC17.53■□□□□ 0.4
PHC1P78364 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PHC1P78364 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PHC1P78364 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.53■□□□□ 0.4
PHC1P78364 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.53■□□□□ 0.4
PHC1P78364 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.53■□□□□ 0.4
PHC1P78364 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.53■□□□□ 0.4
PHC1P78364 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.53■□□□□ 0.4
PHC1P78364 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.53■□□□□ 0.4
PHC1P78364 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PHC1P78364 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PHC1P78364 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PHC1P78364 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PHC1P78364 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHC1P78364 KRT8P50-201ENST00000562022 1438 ntBASIC17.53■□□□□ 0.4
PHC1P78364 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms