Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.09■□□□□ 0.17
HIST1H3AP68431 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 NEK4P2-201ENST00000580004 1012 ntBASIC16.09■□□□□ 0.17
HIST1H3AP68431 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIST1H3AP68431 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HIST1H3AP68431 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
HIST1H3AP68431 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H3AP68431 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.08■□□□□ 0.17
HIST1H3AP68431 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H3AP68431 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.08■□□□□ 0.17
HIST1H3AP68431 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIST1H3AP68431 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
HIST1H3AP68431 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.08■□□□□ 0.17
HIST1H3AP68431 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H3AP68431 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H3AP68431 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H3AP68431 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 AC009065.1-201ENST00000564055 1225 ntBASIC16.08■□□□□ 0.16
HIST1H3AP68431 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H3AP68431 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 LINC01568-207ENST00000641790 1380 ntBASIC16.08■□□□□ 0.16
HIST1H3AP68431 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H3AP68431 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HIST1H3AP68431 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H3AP68431 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.08■□□□□ 0.16
HIST1H3AP68431 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 AC009947.2-201ENST00000444014 672 ntBASIC16.07■□□□□ 0.16
HIST1H3AP68431 SEC1P-202ENST00000473944 940 ntBASIC16.07■□□□□ 0.16
HIST1H3AP68431 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 KRT18P22-201ENST00000402024 1347 ntBASIC16.07■□□□□ 0.16
HIST1H3AP68431 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIST1H3AP68431 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H3AP68431 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms