Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNRPEP62304 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNRPEP62304 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNRPEP62304 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.16□□□□□ -0.14
SNRPEP62304 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNRPEP62304 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SNRPEP62304 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.15□□□□□ -0.14
SNRPEP62304 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SNRPEP62304 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SNRPEP62304 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.15□□□□□ -0.14
SNRPEP62304 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 AC093677.2-201ENST00000600169 1863 ntBASIC14.15□□□□□ -0.14
SNRPEP62304 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.15□□□□□ -0.14
SNRPEP62304 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SNRPEP62304 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
SNRPEP62304 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SNRPEP62304 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.15□□□□□ -0.14
SNRPEP62304 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SNRPEP62304 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.15□□□□□ -0.14
SNRPEP62304 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SNRPEP62304 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.15□□□□□ -0.15
SNRPEP62304 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SNRPEP62304 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.14□□□□□ -0.15
SNRPEP62304 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
SNRPEP62304 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
SNRPEP62304 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SNRPEP62304 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.14□□□□□ -0.15
SNRPEP62304 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SNRPEP62304 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.14□□□□□ -0.15
SNRPEP62304 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SNRPEP62304 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SNRPEP62304 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SNRPEP62304 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SNRPEP62304 SPCS2P3-201ENST00000500401 656 ntBASIC14.14□□□□□ -0.15
SNRPEP62304 AC022413.1-201ENST00000624602 984 ntBASIC14.14□□□□□ -0.15
SNRPEP62304 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.14□□□□□ -0.15
SNRPEP62304 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SNRPEP62304 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SNRPEP62304 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.14□□□□□ -0.15
SNRPEP62304 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.14□□□□□ -0.15
SNRPEP62304 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 CICP4-201ENST00000447359 2812 ntBASIC14.14□□□□□ -0.15
SNRPEP62304 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SNRPEP62304 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms