Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.27■□□□□ 0.84
PMS1P54277 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PMS1P54277 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PMS1P54277 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS1P54277 KRT18P23-201ENST00000435622 1283 ntBASIC20.27■□□□□ 0.84
PMS1P54277 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.27■□□□□ 0.84
PMS1P54277 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
PMS1P54277 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PMS1P54277 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS1P54277 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PMS1P54277 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS1P54277 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.27■□□□□ 0.84
PMS1P54277 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PMS1P54277 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.26■□□□□ 0.83
PMS1P54277 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 GMCL1P1-201ENST00000463439 1581 ntBASIC20.26■□□□□ 0.83
PMS1P54277 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PMS1P54277 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 TSPY14P-201ENST00000303979 915 ntBASIC20.26■□□□□ 0.83
PMS1P54277 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.26■□□□□ 0.83
PMS1P54277 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PMS1P54277 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.26■□□□□ 0.83
PMS1P54277 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.26■□□□□ 0.83
PMS1P54277 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 AC010947.1-201ENST00000623454 693 ntBASIC20.26■□□□□ 0.83
PMS1P54277 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.26■□□□□ 0.83
PMS1P54277 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.26■□□□□ 0.83
PMS1P54277 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PMS1P54277 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.26■□□□□ 0.83
PMS1P54277 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 KRT17P2-201ENST00000300992 1314 ntBASIC20.26■□□□□ 0.83
PMS1P54277 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PMS1P54277 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PMS1P54277 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.25■□□□□ 0.83
PMS1P54277 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.25■□□□□ 0.83
PMS1P54277 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.25■□□□□ 0.83
PMS1P54277 CCR12P-201ENST00000446203 998 ntBASIC20.25■□□□□ 0.83
PMS1P54277 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 BX088651.1-201ENST00000540551 451 ntBASIC20.25■□□□□ 0.83
PMS1P54277 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.25■□□□□ 0.83
PMS1P54277 AC116562.4-202ENST00000641738 218 ntBASIC20.25■□□□□ 0.83
PMS1P54277 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PMS1P54277 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.25■□□□□ 0.83
PMS1P54277 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PMS1P54277 AC009102.3-201ENST00000623118 1491 ntBASIC20.24■□□□□ 0.83
PMS1P54277 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.24■□□□□ 0.83
PMS1P54277 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.24■□□□□ 0.83
PMS1P54277 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PMS1P54277 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.24■□□□□ 0.83
PMS1P54277 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.24■□□□□ 0.83
PMS1P54277 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.24■□□□□ 0.83
PMS1P54277 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PMS1P54277 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PMS1P54277 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.24■□□□□ 0.83
PMS1P54277 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PMS1P54277 LINC01126-201ENST00000623515 1646 ntBASIC20.24■□□□□ 0.83
PMS1P54277 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms