Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 AP002414.3-201ENST00000589352 1468 ntBASIC18.31■□□□□ 0.52
NUBP1P53384 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
NUBP1P53384 SLC25A24-204ENST00000569674 2357 ntBASIC18.31■□□□□ 0.52
NUBP1P53384 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.3■□□□□ 0.52
NUBP1P53384 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.3■□□□□ 0.52
NUBP1P53384 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.3■□□□□ 0.52
NUBP1P53384 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
NUBP1P53384 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NUBP1P53384 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NUBP1P53384 AL390039.1-201ENST00000399148 611 ntBASIC18.3■□□□□ 0.52
NUBP1P53384 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.3■□□□□ 0.52
NUBP1P53384 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.3■□□□□ 0.52
NUBP1P53384 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NUBP1P53384 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NUBP1P53384 AC133552.4-201ENST00000576103 676 ntBASIC18.3■□□□□ 0.52
NUBP1P53384 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 AC005593.1-201ENST00000624894 515 ntBASIC18.3■□□□□ 0.52
NUBP1P53384 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.3■□□□□ 0.52
NUBP1P53384 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NUBP1P53384 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.3■□□□□ 0.52
NUBP1P53384 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
NUBP1P53384 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NUBP1P53384 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 AC063926.2-201ENST00000623766 1308 ntBASIC18.29■□□□□ 0.52
NUBP1P53384 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.29■□□□□ 0.52
NUBP1P53384 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 KRT8P32-201ENST00000512863 1461 ntBASIC18.29■□□□□ 0.52
NUBP1P53384 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NUBP1P53384 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NUBP1P53384 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.29■□□□□ 0.52
NUBP1P53384 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.29■□□□□ 0.52
NUBP1P53384 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.29■□□□□ 0.52
NUBP1P53384 PRSS29P-201ENST00000440800 595 ntBASIC18.29■□□□□ 0.52
NUBP1P53384 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.29■□□□□ 0.52
NUBP1P53384 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.29■□□□□ 0.52
NUBP1P53384 AC068472.1-201ENST00000474589 881 ntBASIC18.29■□□□□ 0.52
NUBP1P53384 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.29■□□□□ 0.52
NUBP1P53384 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.29■□□□□ 0.52
NUBP1P53384 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.29■□□□□ 0.52
NUBP1P53384 AC122134.1-202ENST00000569111 1201 ntBASIC18.29■□□□□ 0.52
NUBP1P53384 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.29■□□□□ 0.52
NUBP1P53384 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.29■□□□□ 0.52
NUBP1P53384 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NUBP1P53384 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.29■□□□□ 0.52
NUBP1P53384 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
NUBP1P53384 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NUBP1P53384 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NUBP1P53384 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.28■□□□□ 0.52
NUBP1P53384 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NUBP1P53384 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NUBP1P53384 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NUBP1P53384 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC18.28■□□□□ 0.52
NUBP1P53384 BTG3P1-201ENST00000435859 716 ntBASIC18.28■□□□□ 0.52
NUBP1P53384 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.28■□□□□ 0.52
NUBP1P53384 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.28■□□□□ 0.52
NUBP1P53384 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC18.28■□□□□ 0.52
NUBP1P53384 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NUBP1P53384 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 NKAPP1-205ENST00000585790 367 ntBASIC18.28■□□□□ 0.52
NUBP1P53384 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.28■□□□□ 0.52
NUBP1P53384 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.28■□□□□ 0.52
NUBP1P53384 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms