Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
POLR2JP52435 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 AP000593.1-201ENST00000393668 712 ntBASIC17.64■□□□□ 0.41
POLR2JP52435 ESRRAP1-201ENST00000400596 1257 ntBASIC17.64■□□□□ 0.41
POLR2JP52435 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 AL353807.1-201ENST00000427475 662 ntBASIC17.64■□□□□ 0.41
POLR2JP52435 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
POLR2JP52435 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.64■□□□□ 0.41
POLR2JP52435 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR2JP52435 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.64■□□□□ 0.41
POLR2JP52435 AC092666.2-201ENST00000613287 246 ntBASIC17.64■□□□□ 0.41
POLR2JP52435 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR2JP52435 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR2JP52435 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.64■□□□□ 0.41
POLR2JP52435 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
POLR2JP52435 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
POLR2JP52435 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 GMCL1P1-201ENST00000463439 1581 ntBASIC17.63■□□□□ 0.41
POLR2JP52435 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
POLR2JP52435 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
POLR2JP52435 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR2JP52435 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
POLR2JP52435 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR2JP52435 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR2JP52435 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR2JP52435 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
POLR2JP52435 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
POLR2JP52435 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.63■□□□□ 0.41
POLR2JP52435 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 AL096828.2-201ENST00000567259 1965 ntBASIC17.62■□□□□ 0.41
POLR2JP52435 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.62■□□□□ 0.41
POLR2JP52435 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.62■□□□□ 0.41
POLR2JP52435 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR2JP52435 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 OR6D1P-202ENST00000641007 5290 ntBASIC17.62■□□□□ 0.41
POLR2JP52435 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR2JP52435 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
POLR2JP52435 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR2JP52435 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
POLR2JP52435 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 MIR564-202ENST00000385049 94 ntBASIC17.62■□□□□ 0.41
POLR2JP52435 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR2JP52435 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
POLR2JP52435 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 AC008622.2-201ENST00000617006 1229 ntBASIC17.62■□□□□ 0.41
POLR2JP52435 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR2JP52435 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
POLR2JP52435 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
POLR2JP52435 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR2JP52435 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR2JP52435 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.62■□□□□ 0.41
POLR2JP52435 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2JP52435 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
POLR2JP52435 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
POLR2JP52435 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2JP52435 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2JP52435 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms