Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCT4P50991 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCT4P50991 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCT4P50991 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCT4P50991 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.21■■□□□ 1.31
CCT4P50991 AL020996.1-203ENST00000536896 2307 ntBASIC23.21■■□□□ 1.31
CCT4P50991 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCT4P50991 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.21■■□□□ 1.31
CCT4P50991 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCT4P50991 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CCT4P50991 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CCT4P50991 AC099343.3-201ENST00000605834 2503 ntBASIC23.2■■□□□ 1.3
CCT4P50991 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.2■■□□□ 1.3
CCT4P50991 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.2■■□□□ 1.3
CCT4P50991 AC090164.3-201ENST00000610780 2143 ntBASIC23.2■■□□□ 1.3
CCT4P50991 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.2■■□□□ 1.3
CCT4P50991 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 ASL-204ENST00000395331 1538 ntTSL 5 BASIC23.2■■□□□ 1.3
CCT4P50991 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.2■■□□□ 1.3
CCT4P50991 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 DUSP5P1-201ENST00000441325 1139 ntBASIC23.2■■□□□ 1.3
CCT4P50991 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.2■■□□□ 1.3
CCT4P50991 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC23.2■■□□□ 1.3
CCT4P50991 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.2■■□□□ 1.3
CCT4P50991 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.2■■□□□ 1.3
CCT4P50991 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.2■■□□□ 1.3
CCT4P50991 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCT4P50991 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.2■■□□□ 1.3
CCT4P50991 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.2■■□□□ 1.3
CCT4P50991 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CCT4P50991 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCT4P50991 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CCT4P50991 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.19■■□□□ 1.3
CCT4P50991 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.19■■□□□ 1.3
CCT4P50991 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.19■■□□□ 1.3
CCT4P50991 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.19■■□□□ 1.3
CCT4P50991 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.19■■□□□ 1.3
CCT4P50991 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CCT4P50991 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCT4P50991 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.19■■□□□ 1.3
CCT4P50991 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.19■■□□□ 1.3
CCT4P50991 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.18■■□□□ 1.3
CCT4P50991 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.18■■□□□ 1.3
CCT4P50991 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.18■■□□□ 1.3
CCT4P50991 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.18■■□□□ 1.3
CCT4P50991 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.18■■□□□ 1.3
CCT4P50991 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.18■■□□□ 1.3
CCT4P50991 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.18■■□□□ 1.3
CCT4P50991 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CCT4P50991 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCT4P50991 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
CCT4P50991 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CCT4P50991 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.18■■□□□ 1.3
CCT4P50991 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCT4P50991 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CCT4P50991 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.17■■□□□ 1.3
CCT4P50991 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCT4P50991 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC23.17■■□□□ 1.3
CCT4P50991 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.17■■□□□ 1.3
CCT4P50991 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.17■■□□□ 1.3
CCT4P50991 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCT4P50991 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms