Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CBX5P45973 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.87■□□□□ 0.13
CBX5P45973 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.87■□□□□ 0.13
CBX5P45973 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.87■□□□□ 0.13
CBX5P45973 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CBX5P45973 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CBX5P45973 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CBX5P45973 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CBX5P45973 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.87■□□□□ 0.13
CBX5P45973 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.87■□□□□ 0.13
CBX5P45973 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.87■□□□□ 0.13
CBX5P45973 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CBX5P45973 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CBX5P45973 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CBX5P45973 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 AC112777.1-201ENST00000540175 1423 ntBASIC15.86■□□□□ 0.13
CBX5P45973 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.86■□□□□ 0.13
CBX5P45973 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CBX5P45973 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CBX5P45973 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.86■□□□□ 0.13
CBX5P45973 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.86■□□□□ 0.13
CBX5P45973 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.86■□□□□ 0.13
CBX5P45973 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.86■□□□□ 0.13
CBX5P45973 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.86■□□□□ 0.13
CBX5P45973 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.86■□□□□ 0.13
CBX5P45973 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CBX5P45973 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CBX5P45973 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.85■□□□□ 0.13
CBX5P45973 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CBX5P45973 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 RCC2P6-201ENST00000526625 1557 ntBASIC15.85■□□□□ 0.13
CBX5P45973 AC092368.3-202ENST00000574180 1591 ntBASIC15.85■□□□□ 0.13
CBX5P45973 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CBX5P45973 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.85■□□□□ 0.13
CBX5P45973 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
CBX5P45973 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.85■□□□□ 0.13
CBX5P45973 AC120498.8-201ENST00000614275 531 ntBASIC15.85■□□□□ 0.13
CBX5P45973 HLA-B-256ENST00000639848 1089 ntBASIC15.85■□□□□ 0.13
CBX5P45973 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CBX5P45973 ESPNP-201ENST00000270691 2015 ntBASIC15.85■□□□□ 0.13
CBX5P45973 CICP6-201ENST00000457191 2729 ntBASIC15.85■□□□□ 0.13
CBX5P45973 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CBX5P45973 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CBX5P45973 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.85■□□□□ 0.13
CBX5P45973 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CBX5P45973 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CBX5P45973 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.84■□□□□ 0.13
CBX5P45973 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX5P45973 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX5P45973 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX5P45973 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX5P45973 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CBX5P45973 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CBX5P45973 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX5P45973 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX5P45973 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX5P45973 AC067852.2-201ENST00000590513 2313 ntBASIC15.84■□□□□ 0.13
CBX5P45973 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CBX5P45973 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms