Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL35P42766 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RPL35P42766 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL35P42766 AC135279.3-201ENST00000610945 1311 ntBASIC14.88□□□□□ -0.03
RPL35P42766 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL35P42766 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RPL35P42766 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL35P42766 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RPL35P42766 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RPL35P42766 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.88□□□□□ -0.03
RPL35P42766 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL35P42766 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 FP475955.4-201ENST00000623131 1990 ntBASIC14.87□□□□□ -0.03
RPL35P42766 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.87□□□□□ -0.03
RPL35P42766 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPL35P42766 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RPL35P42766 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.87□□□□□ -0.03
RPL35P42766 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RPL35P42766 KRT8P20-201ENST00000423953 1409 ntBASIC14.87□□□□□ -0.03
RPL35P42766 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
RPL35P42766 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.87□□□□□ -0.03
RPL35P42766 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 CCDC92B-201ENST00000575506 885 ntBASIC14.87□□□□□ -0.03
RPL35P42766 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.87□□□□□ -0.03
RPL35P42766 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.87□□□□□ -0.03
RPL35P42766 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.87□□□□□ -0.03
RPL35P42766 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RPL35P42766 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL35P42766 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RPL35P42766 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.86□□□□□ -0.03
RPL35P42766 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.86□□□□□ -0.03
RPL35P42766 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RPL35P42766 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.86□□□□□ -0.03
RPL35P42766 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.86□□□□□ -0.03
RPL35P42766 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.86□□□□□ -0.03
RPL35P42766 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.86□□□□□ -0.03
RPL35P42766 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.86□□□□□ -0.03
RPL35P42766 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.86□□□□□ -0.03
RPL35P42766 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.86□□□□□ -0.03
RPL35P42766 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RPL35P42766 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms