Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIA1P42261 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.68■□□□□ 0.58
GRIA1P42261 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GRIA1P42261 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.67■□□□□ 0.58
GRIA1P42261 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GRIA1P42261 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.67■□□□□ 0.58
GRIA1P42261 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.67■□□□□ 0.58
GRIA1P42261 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.67■□□□□ 0.58
GRIA1P42261 MIR4497-201ENST00000583208 89 ntBASIC18.67■□□□□ 0.58
GRIA1P42261 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GRIA1P42261 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.67■□□□□ 0.58
GRIA1P42261 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.67■□□□□ 0.58
GRIA1P42261 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 AL163051.1-201ENST00000569214 1512 ntBASIC18.67■□□□□ 0.58
GRIA1P42261 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
GRIA1P42261 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.67■□□□□ 0.58
GRIA1P42261 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GRIA1P42261 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GRIA1P42261 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIA1P42261 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GRIA1P42261 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.66■□□□□ 0.58
GRIA1P42261 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GRIA1P42261 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
GRIA1P42261 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.66■□□□□ 0.58
GRIA1P42261 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.66■□□□□ 0.58
GRIA1P42261 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GRIA1P42261 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GRIA1P42261 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIA1P42261 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIA1P42261 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.66■□□□□ 0.58
GRIA1P42261 PHGDH-209ENST00000641074 1780 ntBASIC18.66■□□□□ 0.58
GRIA1P42261 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIA1P42261 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIA1P42261 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.66■□□□□ 0.58
GRIA1P42261 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.66■□□□□ 0.58
GRIA1P42261 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.66■□□□□ 0.58
GRIA1P42261 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.66■□□□□ 0.58
GRIA1P42261 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GRIA1P42261 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GRIA1P42261 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GRIA1P42261 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GRIA1P42261 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIA1P42261 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GRIA1P42261 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIA1P42261 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 AL096828.2-201ENST00000567259 1965 ntBASIC18.65■□□□□ 0.58
GRIA1P42261 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
GRIA1P42261 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GRIA1P42261 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIA1P42261 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 KRT18P23-201ENST00000435622 1283 ntBASIC18.65■□□□□ 0.58
GRIA1P42261 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.65■□□□□ 0.58
GRIA1P42261 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.65■□□□□ 0.58
GRIA1P42261 WWOX-216ENST00000569818 525 ntBASIC18.65■□□□□ 0.58
GRIA1P42261 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.65■□□□□ 0.58
GRIA1P42261 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
GRIA1P42261 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GRIA1P42261 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.65■□□□□ 0.58
GRIA1P42261 KRT17P2-201ENST00000300992 1314 ntBASIC18.65■□□□□ 0.58
GRIA1P42261 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GRIA1P42261 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GRIA1P42261 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIA1P42261 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIA1P42261 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GRIA1P42261 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.65■□□□□ 0.58
GRIA1P42261 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIA1P42261 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
GRIA1P42261 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GRIA1P42261 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
GRIA1P42261 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.64■□□□□ 0.58
GRIA1P42261 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
GRIA1P42261 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GRIA1P42261 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms