Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.89■□□□□ 0.77
TNFSF9P41273 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 AC024563.2-201ENST00000603282 481 ntBASIC19.89■□□□□ 0.77
TNFSF9P41273 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.89■□□□□ 0.77
TNFSF9P41273 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.89■□□□□ 0.77
TNFSF9P41273 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF9P41273 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.89■□□□□ 0.77
TNFSF9P41273 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TNFSF9P41273 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TNFSF9P41273 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TNFSF9P41273 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TNFSF9P41273 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.88■□□□□ 0.77
TNFSF9P41273 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFSF9P41273 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.88■□□□□ 0.77
TNFSF9P41273 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.88■□□□□ 0.77
TNFSF9P41273 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.88■□□□□ 0.77
TNFSF9P41273 AC011498.5-201ENST00000592027 486 ntBASIC19.88■□□□□ 0.77
TNFSF9P41273 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFSF9P41273 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFSF9P41273 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFSF9P41273 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFSF9P41273 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.88■□□□□ 0.77
TNFSF9P41273 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.88■□□□□ 0.77
TNFSF9P41273 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF9P41273 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
TNFSF9P41273 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF9P41273 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TNFSF9P41273 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFSF9P41273 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF9P41273 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TNFSF9P41273 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF9P41273 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.87■□□□□ 0.77
TNFSF9P41273 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.87■□□□□ 0.77
TNFSF9P41273 KRT18P48-201ENST00000434763 852 ntBASIC19.87■□□□□ 0.77
TNFSF9P41273 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.87■□□□□ 0.77
TNFSF9P41273 AP003733.1-201ENST00000491725 852 ntBASIC19.87■□□□□ 0.77
TNFSF9P41273 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF9P41273 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.87■□□□□ 0.77
TNFSF9P41273 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.87■□□□□ 0.77
TNFSF9P41273 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFSF9P41273 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF9P41273 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF9P41273 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.87■□□□□ 0.77
TNFSF9P41273 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.87■□□□□ 0.77
TNFSF9P41273 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFSF9P41273 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF9P41273 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF9P41273 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF9P41273 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFSF9P41273 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TNFSF9P41273 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFSF9P41273 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.86■□□□□ 0.77
TNFSF9P41273 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.86■□□□□ 0.77
TNFSF9P41273 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF9P41273 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TNFSF9P41273 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
TNFSF9P41273 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TNFSF9P41273 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF9P41273 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.86■□□□□ 0.77
TNFSF9P41273 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF9P41273 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.86■□□□□ 0.77
TNFSF9P41273 AC005332.3-201ENST00000589904 676 ntBASIC19.86■□□□□ 0.77
TNFSF9P41273 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TNFSF9P41273 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.86■□□□□ 0.77
TNFSF9P41273 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 Z83836.1-201ENST00000624605 1642 ntBASIC19.86■□□□□ 0.77
TNFSF9P41273 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF9P41273 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF9P41273 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
TNFSF9P41273 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF9P41273 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TNFSF9P41273 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms