Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RFC1P35251 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFC1P35251 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.41■□□□□ 0.7
RFC1P35251 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.41■□□□□ 0.7
RFC1P35251 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.41■□□□□ 0.7
RFC1P35251 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.41■□□□□ 0.7
RFC1P35251 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RFC1P35251 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.41■□□□□ 0.7
RFC1P35251 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RFC1P35251 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC1P35251 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC1P35251 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC1P35251 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFC1P35251 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RFC1P35251 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC1P35251 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC1P35251 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC1P35251 AL354751.1-201ENST00000412768 1863 ntBASIC19.4■□□□□ 0.7
RFC1P35251 AL390961.4-201ENST00000623958 2535 ntBASIC19.4■□□□□ 0.7
RFC1P35251 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFC1P35251 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
RFC1P35251 HMGA1P5-201ENST00000412453 271 ntBASIC19.4■□□□□ 0.7
RFC1P35251 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC1P35251 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC1P35251 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.4■□□□□ 0.7
RFC1P35251 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.4■□□□□ 0.7
RFC1P35251 AC145285.6-201ENST00000604632 637 ntBASIC19.4■□□□□ 0.7
RFC1P35251 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC1P35251 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC1P35251 KRT18P22-201ENST00000402024 1347 ntBASIC19.4■□□□□ 0.7
RFC1P35251 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RFC1P35251 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC1P35251 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC1P35251 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.4■□□□□ 0.7
RFC1P35251 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RFC1P35251 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RFC1P35251 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC1P35251 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC1P35251 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RFC1P35251 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC1P35251 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC1P35251 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RFC1P35251 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC1P35251 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.39■□□□□ 0.69
RFC1P35251 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.39■□□□□ 0.69
RFC1P35251 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC1P35251 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.39■□□□□ 0.69
RFC1P35251 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC1P35251 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.39■□□□□ 0.69
RFC1P35251 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC1P35251 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 KRT8P7-201ENST00000533003 1432 ntBASIC19.39■□□□□ 0.69
RFC1P35251 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RFC1P35251 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC1P35251 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.39■□□□□ 0.69
RFC1P35251 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.39■□□□□ 0.69
RFC1P35251 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFC1P35251 AC135776.1-201ENST00000319817 2481 ntBASIC19.39■□□□□ 0.69
RFC1P35251 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RFC1P35251 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RFC1P35251 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RFC1P35251 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 ESPNP-201ENST00000270691 2015 ntBASIC19.38■□□□□ 0.69
RFC1P35251 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms