Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 DANCR-204ENST00000444958 709 ntTSL 3 BASIC22.04■■□□□ 1.12
COL4A5P29400 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.04■■□□□ 1.12
COL4A5P29400 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.04■■□□□ 1.12
COL4A5P29400 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 AL158211.5-201ENST00000623583 2518 ntBASIC22.04■■□□□ 1.12
COL4A5P29400 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.04■■□□□ 1.12
COL4A5P29400 AC009102.3-201ENST00000623118 1491 ntBASIC22.04■■□□□ 1.12
COL4A5P29400 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.04■■□□□ 1.12
COL4A5P29400 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.04■■□□□ 1.12
COL4A5P29400 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.04■■□□□ 1.12
COL4A5P29400 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.04■■□□□ 1.12
COL4A5P29400 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.04■■□□□ 1.12
COL4A5P29400 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.04■■□□□ 1.12
COL4A5P29400 AC107918.4-202ENST00000641623 219 ntBASIC22.04■■□□□ 1.12
COL4A5P29400 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL4A5P29400 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL4A5P29400 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.04■■□□□ 1.12
COL4A5P29400 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.04■■□□□ 1.12
COL4A5P29400 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL4A5P29400 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.04■■□□□ 1.12
COL4A5P29400 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL4A5P29400 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL4A5P29400 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL4A5P29400 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.03■■□□□ 1.12
COL4A5P29400 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.03■■□□□ 1.12
COL4A5P29400 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.03■■□□□ 1.12
COL4A5P29400 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.03■■□□□ 1.12
COL4A5P29400 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL4A5P29400 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.03■■□□□ 1.12
COL4A5P29400 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.03■■□□□ 1.12
COL4A5P29400 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.03■■□□□ 1.12
COL4A5P29400 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.03■■□□□ 1.12
COL4A5P29400 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.03■■□□□ 1.12
COL4A5P29400 MTDHP4-201ENST00000600287 670 ntBASIC22.03■■□□□ 1.12
COL4A5P29400 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL4A5P29400 AC009154.2-201ENST00000621177 724 ntBASIC22.03■■□□□ 1.12
COL4A5P29400 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.03■■□□□ 1.12
COL4A5P29400 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL4A5P29400 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
COL4A5P29400 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL4A5P29400 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL4A5P29400 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL4A5P29400 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL4A5P29400 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL4A5P29400 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL4A5P29400 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL4A5P29400 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
COL4A5P29400 AC009947.1-201ENST00000444350 727 ntBASIC22.02■■□□□ 1.12
COL4A5P29400 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.02■■□□□ 1.12
COL4A5P29400 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.02■■□□□ 1.12
COL4A5P29400 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
COL4A5P29400 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
COL4A5P29400 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
COL4A5P29400 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.02■■□□□ 1.12
COL4A5P29400 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL4A5P29400 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL4A5P29400 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
COL4A5P29400 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
COL4A5P29400 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A5P29400 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.01■■□□□ 1.11
COL4A5P29400 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.01■■□□□ 1.11
COL4A5P29400 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.01■■□□□ 1.11
COL4A5P29400 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.01■■□□□ 1.11
COL4A5P29400 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.01■■□□□ 1.11
COL4A5P29400 NKAPP1-205ENST00000585790 367 ntBASIC22.01■■□□□ 1.11
COL4A5P29400 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A5P29400 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A5P29400 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.01■■□□□ 1.11
COL4A5P29400 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A5P29400 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.01■■□□□ 1.11
COL4A5P29400 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
COL4A5P29400 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
COL4A5P29400 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
COL4A5P29400 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A5P29400 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.01■■□□□ 1.11
COL4A5P29400 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
COL4A5P29400 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
COL4A5P29400 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A5P29400 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL4A5P29400 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A5P29400 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
COL4A5P29400 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22■■□□□ 1.11
COL4A5P29400 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL4A5P29400 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL4A5P29400 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL4A5P29400 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A5P29400 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A5P29400 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A5P29400 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL4A5P29400 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL4A5P29400 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms