Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CR769767.2-201ENST00000622735 460 ntBASIC16.89■□□□□ 0.29
SHC1P29353 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.89■□□□□ 0.29
SHC1P29353 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SHC1P29353 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.89■□□□□ 0.29
SHC1P29353 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.89■□□□□ 0.29
SHC1P29353 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SHC1P29353 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.88■□□□□ 0.29
SHC1P29353 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SHC1P29353 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.88■□□□□ 0.29
SHC1P29353 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.88■□□□□ 0.29
SHC1P29353 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SHC1P29353 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.88■□□□□ 0.29
SHC1P29353 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SHC1P29353 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SHC1P29353 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 AL109659.2-201ENST00000606809 1674 ntBASIC16.88■□□□□ 0.29
SHC1P29353 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHC1P29353 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHC1P29353 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.87■□□□□ 0.29
SHC1P29353 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SHC1P29353 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.87■□□□□ 0.29
SHC1P29353 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SHC1P29353 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SHC1P29353 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC1P29353 RCN1P1-201ENST00000400413 996 ntBASIC16.87■□□□□ 0.29
SHC1P29353 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC1P29353 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.87■□□□□ 0.29
SHC1P29353 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC1P29353 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 AC073508.3-201ENST00000619697 1419 ntBASIC16.87■□□□□ 0.29
SHC1P29353 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC1P29353 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.87■□□□□ 0.29
SHC1P29353 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHC1P29353 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.86■□□□□ 0.29
SHC1P29353 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.86■□□□□ 0.29
SHC1P29353 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.86■□□□□ 0.29
SHC1P29353 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.86■□□□□ 0.29
SHC1P29353 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.86■□□□□ 0.29
SHC1P29353 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.86■□□□□ 0.29
SHC1P29353 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms