Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HTR1BP28222 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTR1BP28222 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HTR1BP28222 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTR1BP28222 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
HTR1BP28222 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.33■□□□□ 0.53
HTR1BP28222 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HTR1BP28222 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.33■□□□□ 0.53
HTR1BP28222 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTR1BP28222 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTR1BP28222 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.33■□□□□ 0.53
HTR1BP28222 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.33■□□□□ 0.53
HTR1BP28222 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTR1BP28222 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
HTR1BP28222 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTR1BP28222 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
HTR1BP28222 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTR1BP28222 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
HTR1BP28222 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HTR1BP28222 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HTR1BP28222 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.33■□□□□ 0.52
HTR1BP28222 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HTR1BP28222 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.33■□□□□ 0.52
HTR1BP28222 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.33■□□□□ 0.52
HTR1BP28222 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HTR1BP28222 AC005332.8-201ENST00000622750 2735 ntBASIC18.33■□□□□ 0.52
HTR1BP28222 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTR1BP28222 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.32■□□□□ 0.52
HTR1BP28222 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.32■□□□□ 0.52
HTR1BP28222 AL391807.1-203ENST00000604392 2365 ntBASIC18.32■□□□□ 0.52
HTR1BP28222 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HTR1BP28222 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HTR1BP28222 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.32■□□□□ 0.52
HTR1BP28222 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HTR1BP28222 SPDYE13P-201ENST00000445314 798 ntBASIC18.32■□□□□ 0.52
HTR1BP28222 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.32■□□□□ 0.52
HTR1BP28222 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.32■□□□□ 0.52
HTR1BP28222 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.32■□□□□ 0.52
HTR1BP28222 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.32■□□□□ 0.52
HTR1BP28222 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HTR1BP28222 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.32■□□□□ 0.52
HTR1BP28222 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.32■□□□□ 0.52
HTR1BP28222 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HTR1BP28222 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HTR1BP28222 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HTR1BP28222 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HTR1BP28222 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.31■□□□□ 0.52
HTR1BP28222 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HTR1BP28222 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HTR1BP28222 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
HTR1BP28222 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.31■□□□□ 0.52
HTR1BP28222 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
HTR1BP28222 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.31■□□□□ 0.52
HTR1BP28222 HLA-F-220ENST00000434407 884 ntBASIC18.31■□□□□ 0.52
HTR1BP28222 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HTR1BP28222 KRT18P56-201ENST00000507275 550 ntBASIC18.31■□□□□ 0.52
HTR1BP28222 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.31■□□□□ 0.52
HTR1BP28222 AC011498.5-201ENST00000592027 486 ntBASIC18.31■□□□□ 0.52
HTR1BP28222 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.31■□□□□ 0.52
HTR1BP28222 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.31■□□□□ 0.52
HTR1BP28222 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HTR1BP28222 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.31■□□□□ 0.52
HTR1BP28222 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.31■□□□□ 0.52
HTR1BP28222 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.31■□□□□ 0.52
HTR1BP28222 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HTR1BP28222 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.31■□□□□ 0.52
HTR1BP28222 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HTR1BP28222 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
HTR1BP28222 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
HTR1BP28222 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HTR1BP28222 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HTR1BP28222 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR1BP28222 AL049812.1-201ENST00000432563 2267 ntBASIC18.3■□□□□ 0.52
HTR1BP28222 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR1BP28222 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HTR1BP28222 Z98044.1-201ENST00000632503 1764 ntBASIC18.3■□□□□ 0.52
HTR1BP28222 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.3■□□□□ 0.52
HTR1BP28222 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR1BP28222 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms