Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.78■□□□□ 0.6
PTPN3P26045 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN3P26045 AL512604.3-201ENST00000569583 964 ntBASIC18.78■□□□□ 0.6
PTPN3P26045 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.78■□□□□ 0.6
PTPN3P26045 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN3P26045 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
PTPN3P26045 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PTPN3P26045 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN3P26045 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN3P26045 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN3P26045 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN3P26045 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PTPN3P26045 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.6
PTPN3P26045 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.77■□□□□ 0.6
PTPN3P26045 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PTPN3P26045 ECEL1P3-201ENST00000427961 737 ntBASIC18.77■□□□□ 0.6
PTPN3P26045 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.77■□□□□ 0.6
PTPN3P26045 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN3P26045 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 SEC1P-202ENST00000473944 940 ntBASIC18.77■□□□□ 0.6
PTPN3P26045 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.77■□□□□ 0.6
PTPN3P26045 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.77■□□□□ 0.6
PTPN3P26045 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN3P26045 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN3P26045 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN3P26045 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN3P26045 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN3P26045 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN3P26045 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PTPN3P26045 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN3P26045 NOC2LP1-202ENST00000452600 2235 ntBASIC18.77■□□□□ 0.59
PTPN3P26045 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
PTPN3P26045 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN3P26045 GMCL1P1-201ENST00000463439 1581 ntBASIC18.76■□□□□ 0.59
PTPN3P26045 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PTPN3P26045 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PTPN3P26045 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN3P26045 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN3P26045 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PTPN3P26045 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 AC010240.3-201ENST00000607688 395 ntBASIC18.76■□□□□ 0.59
PTPN3P26045 AC024243.1-201ENST00000609234 778 ntBASIC18.76■□□□□ 0.59
PTPN3P26045 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PTPN3P26045 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN3P26045 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN3P26045 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms