Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL8A2P25067 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL8A2P25067 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.55■□□□□ 0.08
COL8A2P25067 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 BX323043.1-201ENST00000641006 1765 ntBASIC15.54■□□□□ 0.08
COL8A2P25067 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL8A2P25067 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.54■□□□□ 0.08
COL8A2P25067 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.54■□□□□ 0.08
COL8A2P25067 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.54■□□□□ 0.08
COL8A2P25067 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.54■□□□□ 0.08
COL8A2P25067 RNF126P1-202ENST00000569893 925 ntBASIC15.54■□□□□ 0.08
COL8A2P25067 AL121672.3-201ENST00000608644 468 ntBASIC15.54■□□□□ 0.08
COL8A2P25067 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.54■□□□□ 0.08
COL8A2P25067 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
COL8A2P25067 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.54■□□□□ 0.08
COL8A2P25067 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.54■□□□□ 0.08
COL8A2P25067 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.54■□□□□ 0.08
COL8A2P25067 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL8A2P25067 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.54■□□□□ 0.08
COL8A2P25067 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL8A2P25067 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.54■□□□□ 0.08
COL8A2P25067 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COL8A2P25067 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.53■□□□□ 0.08
COL8A2P25067 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
COL8A2P25067 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.53■□□□□ 0.08
COL8A2P25067 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
COL8A2P25067 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 ATP5G2P1-201ENST00000433580 426 ntBASIC15.53■□□□□ 0.08
COL8A2P25067 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
COL8A2P25067 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.53■□□□□ 0.08
COL8A2P25067 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.53■□□□□ 0.08
COL8A2P25067 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
COL8A2P25067 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 AC092119.3-201ENST00000612618 583 ntBASIC15.53■□□□□ 0.08
COL8A2P25067 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.53■□□□□ 0.08
COL8A2P25067 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.53■□□□□ 0.08
COL8A2P25067 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.53■□□□□ 0.08
COL8A2P25067 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
COL8A2P25067 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.53■□□□□ 0.08
COL8A2P25067 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL8A2P25067 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
COL8A2P25067 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.52■□□□□ 0.08
COL8A2P25067 AC099343.3-201ENST00000605834 2503 ntBASIC15.52■□□□□ 0.08
COL8A2P25067 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.52■□□□□ 0.08
COL8A2P25067 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
COL8A2P25067 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL8A2P25067 TSPY22P-201ENST00000427496 604 ntBASIC15.52■□□□□ 0.08
COL8A2P25067 KRT18P48-201ENST00000434763 852 ntBASIC15.52■□□□□ 0.08
COL8A2P25067 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.52■□□□□ 0.08
COL8A2P25067 TSSC2-201ENST00000450217 709 ntBASIC15.52■□□□□ 0.08
COL8A2P25067 KRT18P41-201ENST00000518924 1277 ntBASIC15.52■□□□□ 0.08
COL8A2P25067 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.52■□□□□ 0.08
COL8A2P25067 KRT8P26-201ENST00000534154 1276 ntBASIC15.52■□□□□ 0.08
COL8A2P25067 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.52■□□□□ 0.08
COL8A2P25067 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.52■□□□□ 0.08
COL8A2P25067 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.52■□□□□ 0.08
COL8A2P25067 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.52■□□□□ 0.08
COL8A2P25067 NPAP1P7-201ENST00000613027 823 ntBASIC15.52■□□□□ 0.08
COL8A2P25067 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.52■□□□□ 0.07
COL8A2P25067 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms