Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNFRSF1BP20333 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 B3GAT3P1-201ENST00000471720 806 ntBASIC17.13■□□□□ 0.33
TNFRSF1BP20333 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNFRSF1BP20333 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 MESTP1-201ENST00000404287 994 ntBASIC17.12■□□□□ 0.33
TNFRSF1BP20333 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 RPPH1-201ENST00000516869 333 ntBASIC17.12■□□□□ 0.33
TNFRSF1BP20333 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 AC026271.3-201ENST00000571884 352 ntBASIC17.12■□□□□ 0.33
TNFRSF1BP20333 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 MIR6786-201ENST00000616843 113 ntBASIC17.12■□□□□ 0.33
TNFRSF1BP20333 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 AL109659.2-201ENST00000606809 1674 ntBASIC17.12■□□□□ 0.33
TNFRSF1BP20333 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFRSF1BP20333 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 AL353807.1-201ENST00000427475 662 ntBASIC17.11■□□□□ 0.33
TNFRSF1BP20333 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 GNAS-203ENST00000306120 1878 ntBASIC17.11■□□□□ 0.33
TNFRSF1BP20333 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF1BP20333 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 GPAT2P1-201ENST00000444924 1672 ntBASIC17.1■□□□□ 0.33
TNFRSF1BP20333 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms