Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 AC009053.2-201ENST00000563701 2365 ntBASIC17.06■□□□□ 0.32
PRKCAP17252 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.06■□□□□ 0.32
PRKCAP17252 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.06■□□□□ 0.32
PRKCAP17252 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRKCAP17252 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PRKCAP17252 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PRKCAP17252 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.05■□□□□ 0.32
PRKCAP17252 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PRKCAP17252 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 GPAT2P1-201ENST00000444924 1672 ntBASIC17.05■□□□□ 0.32
PRKCAP17252 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.05■□□□□ 0.32
PRKCAP17252 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 AC087499.1-201ENST00000418141 1075 ntBASIC17.05■□□□□ 0.32
PRKCAP17252 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.05■□□□□ 0.32
PRKCAP17252 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.05■□□□□ 0.32
PRKCAP17252 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.05■□□□□ 0.32
PRKCAP17252 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 NOC2LP2-201ENST00000407594 1944 ntBASIC17.05■□□□□ 0.32
PRKCAP17252 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRKCAP17252 AC093525.10-201ENST00000625130 1569 ntBASIC17.05■□□□□ 0.32
PRKCAP17252 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PRKCAP17252 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.05■□□□□ 0.32
PRKCAP17252 HTR7P1-202ENST00000624664 4411 ntBASIC17.05■□□□□ 0.32
PRKCAP17252 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PRKCAP17252 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.05■□□□□ 0.32
PRKCAP17252 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRKCAP17252 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.04■□□□□ 0.32
PRKCAP17252 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.04■□□□□ 0.32
PRKCAP17252 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.04■□□□□ 0.32
PRKCAP17252 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PRKCAP17252 AL023284.2-201ENST00000405850 579 ntBASIC17.04■□□□□ 0.32
PRKCAP17252 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.04■□□□□ 0.32
PRKCAP17252 AC007663.1-201ENST00000438948 1240 ntBASIC17.04■□□□□ 0.32
PRKCAP17252 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 AP003041.3-201ENST00000527151 707 ntBASIC17.04■□□□□ 0.32
PRKCAP17252 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.04■□□□□ 0.32
PRKCAP17252 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PRKCAP17252 AC073912.3-201ENST00000624414 853 ntBASIC17.04■□□□□ 0.32
PRKCAP17252 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.04■□□□□ 0.32
PRKCAP17252 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.04■□□□□ 0.32
PRKCAP17252 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.04■□□□□ 0.32
PRKCAP17252 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.04■□□□□ 0.32
PRKCAP17252 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.04■□□□□ 0.32
PRKCAP17252 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.04■□□□□ 0.32
PRKCAP17252 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRKCAP17252 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRKCAP17252 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRKCAP17252 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRKCAP17252 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRKCAP17252 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.03■□□□□ 0.32
PRKCAP17252 MTMR9LP-203ENST00000426597 1545 ntBASIC17.03■□□□□ 0.32
PRKCAP17252 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRKCAP17252 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PRKCAP17252 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRKCAP17252 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.03■□□□□ 0.32
PRKCAP17252 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.03■□□□□ 0.32
PRKCAP17252 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.03■□□□□ 0.32
PRKCAP17252 AC128688.1-201ENST00000487626 519 ntBASIC17.03■□□□□ 0.32
PRKCAP17252 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.03■□□□□ 0.32
PRKCAP17252 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.03■□□□□ 0.32
PRKCAP17252 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.03■□□□□ 0.32
PRKCAP17252 MIR4674-201ENST00000582457 87 ntBASIC17.03■□□□□ 0.32
PRKCAP17252 AC010653.2-201ENST00000623505 997 ntBASIC17.03■□□□□ 0.32
PRKCAP17252 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.03■□□□□ 0.32
PRKCAP17252 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.03■□□□□ 0.32
PRKCAP17252 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRKCAP17252 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms