Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.52■□□□□ 0.24
PPP3CBP16298 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.52■□□□□ 0.24
PPP3CBP16298 AC009947.2-201ENST00000444014 672 ntBASIC16.52■□□□□ 0.24
PPP3CBP16298 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.52■□□□□ 0.24
PPP3CBP16298 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.52■□□□□ 0.24
PPP3CBP16298 AL023973.1-201ENST00000624619 620 ntBASIC16.52■□□□□ 0.24
PPP3CBP16298 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PPP3CBP16298 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PPP3CBP16298 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
PPP3CBP16298 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PPP3CBP16298 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PPP3CBP16298 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.52■□□□□ 0.23
PPP3CBP16298 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PPP3CBP16298 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PPP3CBP16298 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
PPP3CBP16298 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PPP3CBP16298 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.51■□□□□ 0.23
PPP3CBP16298 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.51■□□□□ 0.23
PPP3CBP16298 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.51■□□□□ 0.23
PPP3CBP16298 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.51■□□□□ 0.23
PPP3CBP16298 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.51■□□□□ 0.23
PPP3CBP16298 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.51■□□□□ 0.23
PPP3CBP16298 AL031133.1-201ENST00000406807 723 ntBASIC16.51■□□□□ 0.23
PPP3CBP16298 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.51■□□□□ 0.23
PPP3CBP16298 AL441883.1-201ENST00000566170 1045 ntBASIC16.51■□□□□ 0.23
PPP3CBP16298 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 SDHAP1-207ENST00000440850 2000 ntBASIC16.51■□□□□ 0.23
PPP3CBP16298 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.51■□□□□ 0.23
PPP3CBP16298 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PPP3CBP16298 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.51■□□□□ 0.23
PPP3CBP16298 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.51■□□□□ 0.23
PPP3CBP16298 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP3CBP16298 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PPP3CBP16298 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.5■□□□□ 0.23
PPP3CBP16298 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PPP3CBP16298 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.5■□□□□ 0.23
PPP3CBP16298 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP3CBP16298 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP3CBP16298 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.5■□□□□ 0.23
PPP3CBP16298 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP3CBP16298 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP3CBP16298 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP3CBP16298 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.5■□□□□ 0.23
PPP3CBP16298 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.5■□□□□ 0.23
PPP3CBP16298 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP3CBP16298 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP3CBP16298 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP3CBP16298 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP3CBP16298 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PPP3CBP16298 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP3CBP16298 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.49■□□□□ 0.23
PPP3CBP16298 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP3CBP16298 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP3CBP16298 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP3CBP16298 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PPP3CBP16298 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.49■□□□□ 0.23
PPP3CBP16298 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP3CBP16298 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP3CBP16298 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PPP3CBP16298 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP3CBP16298 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP3CBP16298 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP3CBP16298 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP3CBP16298 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms