Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLUP10909 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLUP10909 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLUP10909 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLUP10909 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.64■□□□□ 0.25
CLUP10909 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.64■□□□□ 0.25
CLUP10909 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.64■□□□□ 0.25
CLUP10909 C1QBPP2-201ENST00000528754 825 ntBASIC16.64■□□□□ 0.25
CLUP10909 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.64■□□□□ 0.25
CLUP10909 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLUP10909 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLUP10909 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLUP10909 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.64■□□□□ 0.25
CLUP10909 AC093677.2-201ENST00000600169 1863 ntBASIC16.64■□□□□ 0.25
CLUP10909 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLUP10909 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLUP10909 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.64■□□□□ 0.25
CLUP10909 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.64■□□□□ 0.25
CLUP10909 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLUP10909 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.64■□□□□ 0.25
CLUP10909 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLUP10909 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLUP10909 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLUP10909 KRT16P1-201ENST00000399124 1418 ntBASIC16.63■□□□□ 0.25
CLUP10909 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.63■□□□□ 0.25
CLUP10909 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.63■□□□□ 0.25
CLUP10909 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.63■□□□□ 0.25
CLUP10909 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
CLUP10909 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.63■□□□□ 0.25
CLUP10909 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 CKBP1-201ENST00000565489 1086 ntBASIC16.63■□□□□ 0.25
CLUP10909 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.63■□□□□ 0.25
CLUP10909 MYC-208ENST00000641036 567 ntBASIC16.63■□□□□ 0.25
CLUP10909 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.63■□□□□ 0.25
CLUP10909 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLUP10909 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLUP10909 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLUP10909 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLUP10909 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.62■□□□□ 0.25
CLUP10909 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.62■□□□□ 0.25
CLUP10909 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 AC099343.3-201ENST00000605834 2503 ntBASIC16.62■□□□□ 0.25
CLUP10909 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CLUP10909 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLUP10909 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLUP10909 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLUP10909 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.62■□□□□ 0.25
CLUP10909 AC128676.1-201ENST00000454392 318 ntBASIC16.62■□□□□ 0.25
CLUP10909 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLUP10909 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CLUP10909 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.62■□□□□ 0.25
CLUP10909 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.62■□□□□ 0.25
CLUP10909 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.62■□□□□ 0.25
CLUP10909 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.62■□□□□ 0.25
CLUP10909 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.62■□□□□ 0.25
CLUP10909 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLUP10909 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CLUP10909 AC008556.1-201ENST00000610908 2040 ntBASIC16.62■□□□□ 0.25
CLUP10909 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.62■□□□□ 0.25
CLUP10909 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.62■□□□□ 0.25
CLUP10909 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLUP10909 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLUP10909 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.62■□□□□ 0.25
CLUP10909 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms