Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 KRT8P50-201ENST00000562022 1438 ntBASIC18.17■□□□□ 0.5
RBP1P09455 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.17■□□□□ 0.5
RBP1P09455 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.17■□□□□ 0.5
RBP1P09455 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.17■□□□□ 0.5
RBP1P09455 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.17■□□□□ 0.5
RBP1P09455 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 REXO1L9P-201ENST00000604264 2108 ntBASIC18.17■□□□□ 0.5
RBP1P09455 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RBP1P09455 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RBP1P09455 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBP1P09455 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RBP1P09455 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RBP1P09455 AC067852.2-201ENST00000590513 2313 ntBASIC18.16■□□□□ 0.5
RBP1P09455 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.16■□□□□ 0.5
RBP1P09455 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.16■□□□□ 0.5
RBP1P09455 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.16■□□□□ 0.5
RBP1P09455 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.16■□□□□ 0.5
RBP1P09455 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.16■□□□□ 0.5
RBP1P09455 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.16■□□□□ 0.5
RBP1P09455 MIR3180-5-201ENST00000583743 153 ntBASIC18.16■□□□□ 0.5
RBP1P09455 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 FLJ13224-201ENST00000313737 1514 ntBASIC18.16■□□□□ 0.5
RBP1P09455 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RBP1P09455 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RBP1P09455 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.16■□□□□ 0.5
RBP1P09455 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.16■□□□□ 0.5
RBP1P09455 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBP1P09455 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RBP1P09455 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RBP1P09455 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RBP1P09455 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.15■□□□□ 0.5
RBP1P09455 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.15■□□□□ 0.5
RBP1P09455 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.15■□□□□ 0.5
RBP1P09455 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RBP1P09455 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.15■□□□□ 0.5
RBP1P09455 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 AC142381.4-202ENST00000563973 229 ntBASIC18.15■□□□□ 0.5
RBP1P09455 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.15■□□□□ 0.5
RBP1P09455 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.15■□□□□ 0.5
RBP1P09455 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RBP1P09455 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.15■□□□□ 0.5
RBP1P09455 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.15■□□□□ 0.5
RBP1P09455 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RBP1P09455 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RBP1P09455 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RBP1P09455 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBP1P09455 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.14■□□□□ 0.5
RBP1P09455 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBP1P09455 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBP1P09455 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.14■□□□□ 0.49
RBP1P09455 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBP1P09455 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBP1P09455 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.14■□□□□ 0.49
RBP1P09455 RPS2P55-201ENST00000397318 883 ntBASIC18.14■□□□□ 0.49
RBP1P09455 UBE2SP1-201ENST00000450587 669 ntBASIC18.14■□□□□ 0.49
RBP1P09455 AC107956.1-201ENST00000494359 873 ntBASIC18.14■□□□□ 0.49
RBP1P09455 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.14■□□□□ 0.49
RBP1P09455 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.14■□□□□ 0.49
RBP1P09455 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.14■□□□□ 0.49
RBP1P09455 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RBP1P09455 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBP1P09455 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.14■□□□□ 0.49
RBP1P09455 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBP1P09455 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
RBP1P09455 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBP1P09455 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBP1P09455 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
RBP1P09455 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RBP1P09455 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms