Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CXCL1P09341 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL1P09341 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL1P09341 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL1P09341 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CXCL1P09341 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CXCL1P09341 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL1P09341 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CXCL1P09341 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL1P09341 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CXCL1P09341 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL1P09341 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL1P09341 AC116351.2-201ENST00000606540 1585 ntBASIC14.3□□□□□ -0.12
CXCL1P09341 REXO1L9P-201ENST00000604264 2108 ntBASIC14.3□□□□□ -0.12
CXCL1P09341 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL1P09341 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL1P09341 PCDHA14-201ENST00000506751 2298 ntBASIC14.3□□□□□ -0.12
CXCL1P09341 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CXCL1P09341 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CXCL1P09341 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.3□□□□□ -0.12
CXCL1P09341 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CXCL1P09341 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.3□□□□□ -0.12
CXCL1P09341 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.3□□□□□ -0.12
CXCL1P09341 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
CXCL1P09341 CYP2T3P-201ENST00000601990 817 ntBASIC14.3□□□□□ -0.12
CXCL1P09341 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CXCL1P09341 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL1P09341 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.3□□□□□ -0.12
CXCL1P09341 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CXCL1P09341 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL1P09341 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CXCL1P09341 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL1P09341 FEM1AP3-201ENST00000403722 1741 ntBASIC14.29□□□□□ -0.12
CXCL1P09341 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CXCL1P09341 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCL1P09341 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCL1P09341 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.29□□□□□ -0.12
CXCL1P09341 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.29□□□□□ -0.12
CXCL1P09341 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCL1P09341 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CXCL1P09341 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 AC018553.1-201ENST00000616682 1458 ntBASIC14.29□□□□□ -0.12
CXCL1P09341 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL1P09341 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL1P09341 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL1P09341 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.28□□□□□ -0.12
CXCL1P09341 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CXCL1P09341 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CXCL1P09341 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL1P09341 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms