Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 AC087499.1-201ENST00000418141 1075 ntBASIC19.09■□□□□ 0.65
CD48P09326 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.09■□□□□ 0.65
CD48P09326 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.09■□□□□ 0.65
CD48P09326 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CD48P09326 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CD48P09326 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
CD48P09326 LINC01568-207ENST00000641790 1380 ntBASIC19.08■□□□□ 0.65
CD48P09326 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 AC068880.1-201ENST00000507289 2297 ntBASIC19.08■□□□□ 0.65
CD48P09326 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CD48P09326 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CD48P09326 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.08■□□□□ 0.65
CD48P09326 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD48P09326 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.08■□□□□ 0.65
CD48P09326 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CD48P09326 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.08■□□□□ 0.64
CD48P09326 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.08■□□□□ 0.64
CD48P09326 AC009947.2-201ENST00000444014 672 ntBASIC19.08■□□□□ 0.64
CD48P09326 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.08■□□□□ 0.64
CD48P09326 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.08■□□□□ 0.64
CD48P09326 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.64
CD48P09326 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 AC112497.1-201ENST00000624824 639 ntBASIC19.08■□□□□ 0.64
CD48P09326 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CD48P09326 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.08■□□□□ 0.64
CD48P09326 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.08■□□□□ 0.64
CD48P09326 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.08■□□□□ 0.64
CD48P09326 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD48P09326 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CD48P09326 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.07■□□□□ 0.64
CD48P09326 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CD48P09326 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.07■□□□□ 0.64
CD48P09326 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.07■□□□□ 0.64
CD48P09326 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.07■□□□□ 0.64
CD48P09326 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.07■□□□□ 0.64
CD48P09326 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.07■□□□□ 0.64
CD48P09326 AC009102.3-201ENST00000623118 1491 ntBASIC19.07■□□□□ 0.64
CD48P09326 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.07■□□□□ 0.64
CD48P09326 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 KRT8P7-201ENST00000533003 1432 ntBASIC19.07■□□□□ 0.64
CD48P09326 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD48P09326 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CD48P09326 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.06■□□□□ 0.64
CD48P09326 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CD48P09326 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD48P09326 PHGDH-209ENST00000641074 1780 ntBASIC19.06■□□□□ 0.64
CD48P09326 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD48P09326 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
CD48P09326 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CD48P09326 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.06■□□□□ 0.64
CD48P09326 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD48P09326 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.06■□□□□ 0.64
CD48P09326 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CD48P09326 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD48P09326 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.06■□□□□ 0.64
CD48P09326 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD48P09326 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.06■□□□□ 0.64
CD48P09326 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CD48P09326 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CD48P09326 MIR149-201ENST00000384879 89 ntBASIC19.06■□□□□ 0.64
CD48P09326 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD48P09326 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms