Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.05■□□□□ 0.64
RHOP08100 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.05■□□□□ 0.64
RHOP08100 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RHOP08100 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RHOP08100 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHOP08100 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.05■□□□□ 0.64
RHOP08100 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.05■□□□□ 0.64
RHOP08100 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.05■□□□□ 0.64
RHOP08100 AC120114.3-201ENST00000611923 658 ntBASIC19.05■□□□□ 0.64
RHOP08100 AC114341.1-201ENST00000618070 349 ntBASIC19.05■□□□□ 0.64
RHOP08100 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.05■□□□□ 0.64
RHOP08100 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RHOP08100 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.04■□□□□ 0.64
RHOP08100 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.04■□□□□ 0.64
RHOP08100 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.04■□□□□ 0.64
RHOP08100 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
RHOP08100 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.04■□□□□ 0.64
RHOP08100 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RHOP08100 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RHOP08100 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
RHOP08100 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.04■□□□□ 0.64
RHOP08100 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RHOP08100 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.04■□□□□ 0.64
RHOP08100 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.04■□□□□ 0.64
RHOP08100 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.04■□□□□ 0.64
RHOP08100 BX640515.1-201ENST00000617215 977 ntBASIC19.04■□□□□ 0.64
RHOP08100 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RHOP08100 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RHOP08100 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RHOP08100 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.04■□□□□ 0.64
RHOP08100 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.03■□□□□ 0.64
RHOP08100 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RHOP08100 SDHAP2-201ENST00000455183 2001 ntBASIC19.03■□□□□ 0.64
RHOP08100 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHOP08100 MYLKP1-201ENST00000509077 1580 ntBASIC19.03■□□□□ 0.64
RHOP08100 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RHOP08100 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHOP08100 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHOP08100 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.03■□□□□ 0.64
RHOP08100 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RHOP08100 AL590627.1-203ENST00000421194 1026 ntBASIC19.03■□□□□ 0.64
RHOP08100 FAM197Y8-203ENST00000450145 560 ntBASIC19.03■□□□□ 0.64
RHOP08100 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.03■□□□□ 0.64
RHOP08100 AC023511.2-201ENST00000618803 211 ntBASIC19.03■□□□□ 0.64
RHOP08100 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHOP08100 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RHOP08100 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RHOP08100 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RHOP08100 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RHOP08100 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.02■□□□□ 0.64
RHOP08100 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.02■□□□□ 0.64
RHOP08100 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.02■□□□□ 0.64
RHOP08100 AC068472.1-201ENST00000474589 881 ntBASIC19.02■□□□□ 0.64
RHOP08100 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.02■□□□□ 0.64
RHOP08100 AP001005.1-201ENST00000571755 1248 ntBASIC19.02■□□□□ 0.64
RHOP08100 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.02■□□□□ 0.64
RHOP08100 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.02■□□□□ 0.64
RHOP08100 AL773604.1-201ENST00000617417 272 ntBASIC19.02■□□□□ 0.64
RHOP08100 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.02■□□□□ 0.64
RHOP08100 AL024508.2-201ENST00000607749 1894 ntBASIC19.02■□□□□ 0.64
RHOP08100 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.02■□□□□ 0.64
RHOP08100 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.02■□□□□ 0.64
RHOP08100 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RHOP08100 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RHOP08100 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RHOP08100 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RHOP08100 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RHOP08100 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RHOP08100 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RHOP08100 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RHOP08100 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RHOP08100 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.01■□□□□ 0.63
RHOP08100 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RHOP08100 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.01■□□□□ 0.63
RHOP08100 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RHOP08100 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHOP08100 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RHOP08100 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms