Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MTMR9LP-203ENST00000426597 1545 ntBASIC18.79■□□□□ 0.6
MT-ND3P03897 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.79■□□□□ 0.6
MT-ND3P03897 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MT-ND3P03897 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.79■□□□□ 0.6
MT-ND3P03897 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.79■□□□□ 0.6
MT-ND3P03897 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.79■□□□□ 0.6
MT-ND3P03897 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.79■□□□□ 0.6
MT-ND3P03897 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.79■□□□□ 0.6
MT-ND3P03897 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.79■□□□□ 0.6
MT-ND3P03897 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.79■□□□□ 0.6
MT-ND3P03897 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.79■□□□□ 0.6
MT-ND3P03897 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 AC068587.9-201ENST00000641814 219 ntBASIC18.79■□□□□ 0.6
MT-ND3P03897 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MT-ND3P03897 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.79■□□□□ 0.6
MT-ND3P03897 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MT-ND3P03897 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND3P03897 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
MT-ND3P03897 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MT-ND3P03897 AC135776.1-201ENST00000319817 2481 ntBASIC18.78■□□□□ 0.6
MT-ND3P03897 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.78■□□□□ 0.6
MT-ND3P03897 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.78■□□□□ 0.6
MT-ND3P03897 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.78■□□□□ 0.6
MT-ND3P03897 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.78■□□□□ 0.6
MT-ND3P03897 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MT-ND3P03897 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 FAM197Y1-201ENST00000421178 764 ntBASIC18.78■□□□□ 0.6
MT-ND3P03897 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.78■□□□□ 0.6
MT-ND3P03897 MYC-208ENST00000641036 567 ntBASIC18.78■□□□□ 0.6
MT-ND3P03897 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.78■□□□□ 0.6
MT-ND3P03897 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
MT-ND3P03897 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND3P03897 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MT-ND3P03897 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
MT-ND3P03897 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MT-ND3P03897 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.77■□□□□ 0.6
MT-ND3P03897 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.77■□□□□ 0.6
MT-ND3P03897 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
MT-ND3P03897 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.77■□□□□ 0.6
MT-ND3P03897 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.77■□□□□ 0.6
MT-ND3P03897 C1QL1P1-201ENST00000568105 661 ntBASIC18.77■□□□□ 0.6
MT-ND3P03897 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.77■□□□□ 0.6
MT-ND3P03897 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.77■□□□□ 0.6
MT-ND3P03897 KRT8P41-201ENST00000533985 1514 ntBASIC18.77■□□□□ 0.6
MT-ND3P03897 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND3P03897 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MT-ND3P03897 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
MT-ND3P03897 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MT-ND3P03897 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.77■□□□□ 0.59
MT-ND3P03897 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MT-ND3P03897 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.76■□□□□ 0.59
MT-ND3P03897 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MT-ND3P03897 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.76■□□□□ 0.59
MT-ND3P03897 ESPNP-201ENST00000270691 2015 ntBASIC18.76■□□□□ 0.59
MT-ND3P03897 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 MMP23A-201ENST00000234610 1017 ntBASIC18.76■□□□□ 0.59
MT-ND3P03897 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MT-ND3P03897 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
MT-ND3P03897 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms