Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRBC1P01850 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBC1P01850 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TRBC1P01850 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TRBC1P01850 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRBC1P01850 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRBC1P01850 LINC01311-201ENST00000565162 1445 ntBASIC18.43■□□□□ 0.54
TRBC1P01850 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 AL031133.1-201ENST00000406807 723 ntBASIC18.43■□□□□ 0.54
TRBC1P01850 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.43■□□□□ 0.54
TRBC1P01850 KRT18P35-201ENST00000510488 1269 ntBASIC18.43■□□□□ 0.54
TRBC1P01850 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.43■□□□□ 0.54
TRBC1P01850 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.43■□□□□ 0.54
TRBC1P01850 AC083849.1-201ENST00000615227 514 ntBASIC18.43■□□□□ 0.54
TRBC1P01850 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBC1P01850 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBC1P01850 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBC1P01850 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBC1P01850 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBC1P01850 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRBC1P01850 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRBC1P01850 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBC1P01850 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TRBC1P01850 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBC1P01850 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TRBC1P01850 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.42■□□□□ 0.54
TRBC1P01850 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.42■□□□□ 0.54
TRBC1P01850 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBC1P01850 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.42■□□□□ 0.54
TRBC1P01850 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBC1P01850 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBC1P01850 AL445228.2-201ENST00000605589 952 ntBASIC18.42■□□□□ 0.54
TRBC1P01850 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.42■□□□□ 0.54
TRBC1P01850 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRBC1P01850 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRBC1P01850 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRBC1P01850 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBC1P01850 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.42■□□□□ 0.54
TRBC1P01850 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRBC1P01850 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRBC1P01850 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.41■□□□□ 0.54
TRBC1P01850 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRBC1P01850 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.41■□□□□ 0.54
TRBC1P01850 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRBC1P01850 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.41■□□□□ 0.54
TRBC1P01850 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBC1P01850 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRBC1P01850 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBC1P01850 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBC1P01850 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRBC1P01850 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBC1P01850 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.4■□□□□ 0.54
TRBC1P01850 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRBC1P01850 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.4■□□□□ 0.54
TRBC1P01850 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBC1P01850 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRBC1P01850 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBC1P01850 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBC1P01850 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBC1P01850 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms