Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
MBD4O95243 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.93■■□□□ 1.1
MBD4O95243 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
MBD4O95243 IGHGP-201ENST00000390555 1178 ntBASIC21.93■■□□□ 1.1
MBD4O95243 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MBD4O95243 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.93■■□□□ 1.1
MBD4O95243 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MBD4O95243 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.93■■□□□ 1.1
MBD4O95243 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MBD4O95243 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.93■■□□□ 1.1
MBD4O95243 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.93■■□□□ 1.1
MBD4O95243 WIZP1-201ENST00000531444 2299 ntBASIC21.93■■□□□ 1.1
MBD4O95243 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.93■■□□□ 1.1
MBD4O95243 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.93■■□□□ 1.1
MBD4O95243 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MBD4O95243 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.93■■□□□ 1.1
MBD4O95243 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.93■■□□□ 1.1
MBD4O95243 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MBD4O95243 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MBD4O95243 AL121672.3-201ENST00000608644 468 ntBASIC21.93■■□□□ 1.1
MBD4O95243 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
MBD4O95243 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
MBD4O95243 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
MBD4O95243 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.93■■□□□ 1.1
MBD4O95243 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MBD4O95243 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.93■■□□□ 1.1
MBD4O95243 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.92■■□□□ 1.1
MBD4O95243 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.92■■□□□ 1.1
MBD4O95243 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.92■■□□□ 1.1
MBD4O95243 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
MBD4O95243 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.92■■□□□ 1.1
MBD4O95243 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MBD4O95243 BX276092.5-203ENST00000456199 560 ntBASIC21.92■■□□□ 1.1
MBD4O95243 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.92■■□□□ 1.1
MBD4O95243 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.92■■□□□ 1.1
MBD4O95243 KRT8P26-201ENST00000534154 1276 ntBASIC21.92■■□□□ 1.1
MBD4O95243 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
MBD4O95243 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.92■■□□□ 1.1
MBD4O95243 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
MBD4O95243 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.92■■□□□ 1.1
MBD4O95243 LINC01126-201ENST00000623515 1646 ntBASIC21.91■■□□□ 1.1
MBD4O95243 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.91■■□□□ 1.1
MBD4O95243 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.91■■□□□ 1.1
MBD4O95243 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
MBD4O95243 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.91■■□□□ 1.1
MBD4O95243 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.91■■□□□ 1.1
MBD4O95243 TSSC2-201ENST00000450217 709 ntBASIC21.91■■□□□ 1.1
MBD4O95243 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.91■■□□□ 1.1
MBD4O95243 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.91■■□□□ 1.1
MBD4O95243 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.91■■□□□ 1.1
MBD4O95243 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MBD4O95243 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.91■■□□□ 1.1
MBD4O95243 GPR32P1-201ENST00000601788 811 ntBASIC21.91■■□□□ 1.1
MBD4O95243 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.91■■□□□ 1.1
MBD4O95243 NPAP1P7-201ENST00000613027 823 ntBASIC21.91■■□□□ 1.1
MBD4O95243 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
MBD4O95243 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
MBD4O95243 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
MBD4O95243 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.91■■□□□ 1.1
MBD4O95243 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
MBD4O95243 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MBD4O95243 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
MBD4O95243 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MBD4O95243 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD4O95243 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD4O95243 KRT89P-201ENST00000620027 1478 ntBASIC21.9■■□□□ 1.1
MBD4O95243 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD4O95243 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
MBD4O95243 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
MBD4O95243 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.9■■□□□ 1.1
MBD4O95243 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
MBD4O95243 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD4O95243 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD4O95243 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.9■■□□□ 1.1
MBD4O95243 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD4O95243 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.9■■□□□ 1.1
MBD4O95243 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.9■■□□□ 1.1
MBD4O95243 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.9■■□□□ 1.1
MBD4O95243 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MBD4O95243 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms