Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 AL356309.3-201ENST00000624132 1934 ntBASIC16.74■□□□□ 0.27
CLPXO76031 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPXO76031 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 AC093677.2-201ENST00000600169 1863 ntBASIC16.73■□□□□ 0.27
CLPXO76031 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
CLPXO76031 UBALD1-205ENST00000590891 2641 ntBASIC16.73■□□□□ 0.27
CLPXO76031 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.73■□□□□ 0.27
CLPXO76031 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLPXO76031 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CLPXO76031 AC010980.2-201ENST00000587099 1412 ntBASIC16.73■□□□□ 0.27
CLPXO76031 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.73■□□□□ 0.27
CLPXO76031 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 AL513477.1-201ENST00000602865 2407 ntBASIC16.73■□□□□ 0.27
CLPXO76031 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CLPXO76031 AL512625.2-201ENST00000417533 625 ntBASIC16.73■□□□□ 0.27
CLPXO76031 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPXO76031 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.73■□□□□ 0.27
CLPXO76031 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 AC093787.1-201ENST00000450396 207 ntBASIC16.73■□□□□ 0.27
CLPXO76031 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.73■□□□□ 0.27
CLPXO76031 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CLPXO76031 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CLPXO76031 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CLPXO76031 AC104417.2-201ENST00000562989 1793 ntBASIC16.73■□□□□ 0.27
CLPXO76031 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.73■□□□□ 0.27
CLPXO76031 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CLPXO76031 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPXO76031 AL023806.1-201ENST00000603994 1649 ntBASIC16.73■□□□□ 0.27
CLPXO76031 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.73■□□□□ 0.27
CLPXO76031 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CLPXO76031 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLPXO76031 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.73■□□□□ 0.27
CLPXO76031 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPXO76031 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPXO76031 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPXO76031 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPXO76031 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPXO76031 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.72■□□□□ 0.27
CLPXO76031 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CLPXO76031 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPXO76031 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLPXO76031 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 CYP2T3P-201ENST00000601990 817 ntBASIC16.72■□□□□ 0.27
CLPXO76031 AC066615.1-201ENST00000640911 628 ntBASIC16.72■□□□□ 0.27
CLPXO76031 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLPXO76031 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 AL596257.1-201ENST00000641463 2694 ntBASIC16.72■□□□□ 0.27
CLPXO76031 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPXO76031 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLPXO76031 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPXO76031 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPXO76031 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPXO76031 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.71■□□□□ 0.27
CLPXO76031 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.71■□□□□ 0.27
CLPXO76031 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLPXO76031 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLPXO76031 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPXO76031 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPXO76031 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLPXO76031 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.71■□□□□ 0.27
CLPXO76031 FAM201B-201ENST00000458407 597 ntBASIC16.71■□□□□ 0.27
CLPXO76031 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.71■□□□□ 0.27
CLPXO76031 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.71■□□□□ 0.27
CLPXO76031 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms