Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.04■□□□□ -0
SSSCA1O60232 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.04■□□□□ -0
SSSCA1O60232 AF201337.1-201ENST00000520239 748 ntBASIC15.04■□□□□ -0
SSSCA1O60232 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.04■□□□□ -0
SSSCA1O60232 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.04■□□□□ -0
SSSCA1O60232 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.04■□□□□ -0
SSSCA1O60232 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.04■□□□□ -0
SSSCA1O60232 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.04■□□□□ -0
SSSCA1O60232 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SSSCA1O60232 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SSSCA1O60232 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SSSCA1O60232 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SSSCA1O60232 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.03■□□□□ -0
SSSCA1O60232 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SSSCA1O60232 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 FLJ13224-201ENST00000313737 1514 ntBASIC15.03■□□□□ -0
SSSCA1O60232 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.03■□□□□ -0
SSSCA1O60232 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SSSCA1O60232 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.03■□□□□ -0
SSSCA1O60232 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.03■□□□□ -0
SSSCA1O60232 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.03■□□□□ -0
SSSCA1O60232 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SSSCA1O60232 MIR6821-201ENST00000617625 74 ntBASIC15.03■□□□□ -0
SSSCA1O60232 AL121829.2-201ENST00000620908 328 ntBASIC15.03■□□□□ -0
SSSCA1O60232 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 AC008556.1-201ENST00000610908 2040 ntBASIC15.03■□□□□ -0
SSSCA1O60232 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.03■□□□□ -0
SSSCA1O60232 AL357033.4-201ENST00000617703 1807 ntBASIC15.03■□□□□ -0
SSSCA1O60232 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.03■□□□□ -0
SSSCA1O60232 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.03■□□□□ -0
SSSCA1O60232 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
SSSCA1O60232 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SSSCA1O60232 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SSSCA1O60232 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.02■□□□□ -0
SSSCA1O60232 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.02■□□□□ -0
SSSCA1O60232 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.02■□□□□ -0
SSSCA1O60232 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.02■□□□□ -0
SSSCA1O60232 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
SSSCA1O60232 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSSCA1O60232 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.02□□□□□ -0.01
SSSCA1O60232 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SSSCA1O60232 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SSSCA1O60232 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
SSSCA1O60232 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSSCA1O60232 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.02□□□□□ -0.01
SSSCA1O60232 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSSCA1O60232 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
SSSCA1O60232 KRT8P32-201ENST00000512863 1461 ntBASIC15.01□□□□□ -0.01
SSSCA1O60232 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.01□□□□□ -0.01
SSSCA1O60232 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms