Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ACTN4O43707 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACTN4O43707 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ACTN4O43707 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACTN4O43707 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.67■□□□□ 0.9
ACTN4O43707 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.67■□□□□ 0.9
ACTN4O43707 GMCL1P1-201ENST00000463439 1581 ntBASIC20.67■□□□□ 0.9
ACTN4O43707 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACTN4O43707 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACTN4O43707 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.67■□□□□ 0.9
ACTN4O43707 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
ACTN4O43707 AL096828.2-201ENST00000567259 1965 ntBASIC20.66■□□□□ 0.9
ACTN4O43707 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
ACTN4O43707 MIR1238-201ENST00000408483 83 ntBASIC20.66■□□□□ 0.9
ACTN4O43707 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.66■□□□□ 0.9
ACTN4O43707 AC007663.1-201ENST00000438948 1240 ntBASIC20.66■□□□□ 0.9
ACTN4O43707 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 TSPY15P-201ENST00000457163 923 ntBASIC20.66■□□□□ 0.9
ACTN4O43707 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.66■□□□□ 0.9
ACTN4O43707 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.66■□□□□ 0.9
ACTN4O43707 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ACTN4O43707 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ACTN4O43707 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.66■□□□□ 0.9
ACTN4O43707 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.66■□□□□ 0.9
ACTN4O43707 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACTN4O43707 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.66■□□□□ 0.9
ACTN4O43707 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ACTN4O43707 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.65■□□□□ 0.9
ACTN4O43707 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.65■□□□□ 0.9
ACTN4O43707 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.65■□□□□ 0.9
ACTN4O43707 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.65■□□□□ 0.9
ACTN4O43707 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.65■□□□□ 0.9
ACTN4O43707 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 KRT18P23-201ENST00000435622 1283 ntBASIC20.65■□□□□ 0.9
ACTN4O43707 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.65■□□□□ 0.9
ACTN4O43707 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ACTN4O43707 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ACTN4O43707 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.65■□□□□ 0.9
ACTN4O43707 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
ACTN4O43707 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ACTN4O43707 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ACTN4O43707 AC009102.3-201ENST00000623118 1491 ntBASIC20.64■□□□□ 0.89
ACTN4O43707 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.64■□□□□ 0.89
ACTN4O43707 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.64■□□□□ 0.89
ACTN4O43707 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN4O43707 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.64■□□□□ 0.89
ACTN4O43707 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN4O43707 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.64■□□□□ 0.89
ACTN4O43707 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN4O43707 INGX-201ENST00000359239 846 ntBASIC20.64■□□□□ 0.89
ACTN4O43707 MIR149-201ENST00000384879 89 ntBASIC20.64■□□□□ 0.89
ACTN4O43707 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ACTN4O43707 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN4O43707 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN4O43707 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN4O43707 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.64■□□□□ 0.89
ACTN4O43707 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACTN4O43707 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.63■□□□□ 0.89
ACTN4O43707 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ACTN4O43707 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ACTN4O43707 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ACTN4O43707 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 CCR12P-201ENST00000446203 998 ntBASIC20.63■□□□□ 0.89
ACTN4O43707 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.63■□□□□ 0.89
ACTN4O43707 BX088651.1-201ENST00000540551 451 ntBASIC20.63■□□□□ 0.89
ACTN4O43707 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.63■□□□□ 0.89
ACTN4O43707 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.63■□□□□ 0.89
ACTN4O43707 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms