Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RTL8CO15255 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.26□□□□□ -0.45
RTL8CO15255 TEX21P-204ENST00000641479 1693 ntBASIC12.26□□□□□ -0.45
RTL8CO15255 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC12.25□□□□□ -0.45
RTL8CO15255 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
RTL8CO15255 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.25□□□□□ -0.45
RTL8CO15255 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.25□□□□□ -0.45
RTL8CO15255 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 FAM220CP-201ENST00000395253 831 ntBASIC12.25□□□□□ -0.45
RTL8CO15255 MIR940-201ENST00000401276 94 ntBASIC12.25□□□□□ -0.45
RTL8CO15255 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.25□□□□□ -0.45
RTL8CO15255 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 BX842568.4-201ENST00000421222 227 ntBASIC12.25□□□□□ -0.45
RTL8CO15255 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.25□□□□□ -0.45
RTL8CO15255 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.25□□□□□ -0.45
RTL8CO15255 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.25□□□□□ -0.45
RTL8CO15255 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.25□□□□□ -0.45
RTL8CO15255 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.25□□□□□ -0.45
RTL8CO15255 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.25□□□□□ -0.45
RTL8CO15255 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RTL8CO15255 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.25□□□□□ -0.45
RTL8CO15255 AL049840.3-201ENST00000602669 611 ntBASIC12.25□□□□□ -0.45
RTL8CO15255 AC008608.2-201ENST00000606089 416 ntBASIC12.25□□□□□ -0.45
RTL8CO15255 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.25□□□□□ -0.45
RTL8CO15255 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 KRT8P32-201ENST00000512863 1461 ntBASIC12.25□□□□□ -0.45
RTL8CO15255 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RTL8CO15255 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.25□□□□□ -0.45
RTL8CO15255 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
RTL8CO15255 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RTL8CO15255 ME2-218ENST00000640965 2476 ntTSL 5 BASIC12.25□□□□□ -0.45
RTL8CO15255 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.25□□□□□ -0.45
RTL8CO15255 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.24□□□□□ -0.45
RTL8CO15255 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RTL8CO15255 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.24□□□□□ -0.45
RTL8CO15255 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RTL8CO15255 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.24□□□□□ -0.45
RTL8CO15255 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.24□□□□□ -0.45
RTL8CO15255 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.24□□□□□ -0.45
RTL8CO15255 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
RTL8CO15255 AC018712.1-201ENST00000455767 687 ntBASIC12.24□□□□□ -0.45
RTL8CO15255 RPL13AP23-201ENST00000480739 586 ntBASIC12.24□□□□□ -0.45
RTL8CO15255 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.24□□□□□ -0.45
RTL8CO15255 AC096582.2-201ENST00000510860 516 ntBASIC12.24□□□□□ -0.45
RTL8CO15255 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.24□□□□□ -0.45
RTL8CO15255 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.24□□□□□ -0.45
RTL8CO15255 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC12.24□□□□□ -0.45
RTL8CO15255 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RTL8CO15255 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RTL8CO15255 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC12.24□□□□□ -0.45
RTL8CO15255 MIR7706-201ENST00000613747 67 ntBASIC12.24□□□□□ -0.45
RTL8CO15255 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
RTL8CO15255 KRT89P-201ENST00000620027 1478 ntBASIC12.24□□□□□ -0.45
RTL8CO15255 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RTL8CO15255 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC12.24□□□□□ -0.45
RTL8CO15255 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RTL8CO15255 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.23□□□□□ -0.45
RTL8CO15255 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RTL8CO15255 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms