Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
ATP2A1O14983 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.05■□□□□ 0.96
ATP2A1O14983 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
ATP2A1O14983 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP2A1O14983 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP2A1O14983 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.05■□□□□ 0.96
ATP2A1O14983 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP2A1O14983 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP2A1O14983 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP2A1O14983 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.05■□□□□ 0.96
ATP2A1O14983 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP2A1O14983 AC009102.3-201ENST00000623118 1491 ntBASIC21.05■□□□□ 0.96
ATP2A1O14983 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP2A1O14983 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ATP2A1O14983 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ATP2A1O14983 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ATP2A1O14983 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 VENTXP7-201ENST00000475503 772 ntBASIC21.04■□□□□ 0.96
ATP2A1O14983 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP2A1O14983 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP2A1O14983 AC099336.1-202ENST00000602961 463 ntBASIC21.04■□□□□ 0.96
ATP2A1O14983 AL031008.1-201ENST00000619963 541 ntBASIC21.04■□□□□ 0.96
ATP2A1O14983 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP2A1O14983 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
ATP2A1O14983 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP2A1O14983 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A1O14983 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP2A1O14983 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ATP2A1O14983 NSUN5P1-202ENST00000421140 1535 ntBASIC21.04■□□□□ 0.96
ATP2A1O14983 NSUN5P2-203ENST00000457352 1529 ntBASIC21.04■□□□□ 0.96
ATP2A1O14983 AC112777.1-201ENST00000540175 1423 ntBASIC21.04■□□□□ 0.96
ATP2A1O14983 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A1O14983 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A1O14983 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A1O14983 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A1O14983 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A1O14983 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP2A1O14983 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ATP2A1O14983 AC091607.1-201ENST00000490318 1060 ntBASIC21.03■□□□□ 0.96
ATP2A1O14983 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.03■□□□□ 0.96
ATP2A1O14983 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP2A1O14983 AL160237.2-201ENST00000556165 472 ntBASIC21.03■□□□□ 0.96
ATP2A1O14983 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.03■□□□□ 0.96
ATP2A1O14983 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.03■□□□□ 0.96
ATP2A1O14983 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.03■□□□□ 0.96
ATP2A1O14983 AC138894.3-201ENST00000603787 634 ntBASIC21.03■□□□□ 0.96
ATP2A1O14983 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP2A1O14983 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.03■□□□□ 0.96
ATP2A1O14983 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ATP2A1O14983 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A1O14983 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A1O14983 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ATP2A1O14983 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ATP2A1O14983 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP2A1O14983 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ATP2A1O14983 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ATP2A1O14983 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ATP2A1O14983 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP2A1O14983 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ATP2A1O14983 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP2A1O14983 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ATP2A1O14983 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 AC011840.4-201ENST00000578471 627 ntBASIC21.02■□□□□ 0.96
ATP2A1O14983 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms