Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC7O00311 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.09■□□□□ 0.49
CDC7O00311 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC7O00311 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
CDC7O00311 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.08■□□□□ 0.49
CDC7O00311 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC7O00311 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.08■□□□□ 0.49
CDC7O00311 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CDC7O00311 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC7O00311 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.08■□□□□ 0.49
CDC7O00311 AL163051.1-201ENST00000569214 1512 ntBASIC18.08■□□□□ 0.49
CDC7O00311 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.08■□□□□ 0.49
CDC7O00311 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC7O00311 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC7O00311 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDC7O00311 HOXB1-202ENST00000577092 1414 ntBASIC18.08■□□□□ 0.49
CDC7O00311 NOC2LP2-201ENST00000407594 1944 ntBASIC18.08■□□□□ 0.49
CDC7O00311 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDC7O00311 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.08■□□□□ 0.49
CDC7O00311 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDC7O00311 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.08■□□□□ 0.48
CDC7O00311 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC7O00311 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC7O00311 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC7O00311 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CDC7O00311 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC7O00311 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.08■□□□□ 0.48
CDC7O00311 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC7O00311 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.08■□□□□ 0.48
CDC7O00311 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDC7O00311 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.08■□□□□ 0.48
CDC7O00311 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.08■□□□□ 0.48
CDC7O00311 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC7O00311 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDC7O00311 SDHAP2-201ENST00000455183 2001 ntBASIC18.08■□□□□ 0.48
CDC7O00311 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CDC7O00311 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 AC068880.1-201ENST00000507289 2297 ntBASIC18.07■□□□□ 0.48
CDC7O00311 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDC7O00311 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.07■□□□□ 0.48
CDC7O00311 REXO1L9P-201ENST00000604264 2108 ntBASIC18.07■□□□□ 0.48
CDC7O00311 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.07■□□□□ 0.48
CDC7O00311 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CDC7O00311 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CDC7O00311 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
CDC7O00311 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CDC7O00311 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 AL596275.1-201ENST00000423464 877 ntBASIC18.07■□□□□ 0.48
CDC7O00311 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.07■□□□□ 0.48
CDC7O00311 EGLN1P1-201ENST00000531623 762 ntBASIC18.07■□□□□ 0.48
CDC7O00311 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.07■□□□□ 0.48
CDC7O00311 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.07■□□□□ 0.48
CDC7O00311 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.07■□□□□ 0.48
CDC7O00311 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.07■□□□□ 0.48
CDC7O00311 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CDC7O00311 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDC7O00311 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CDC7O00311 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDC7O00311 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDC7O00311 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDC7O00311 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.06■□□□□ 0.48
CDC7O00311 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 AC093827.2-201ENST00000512654 315 ntBASIC18.06■□□□□ 0.48
CDC7O00311 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 AC010653.2-201ENST00000623505 997 ntBASIC18.06■□□□□ 0.48
CDC7O00311 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDC7O00311 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CDC7O00311 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC7O00311 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms