Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 BX276092.5-203ENST00000456199 560 ntBASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 AC092329.2-201ENST00000598402 547 ntBASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.07■□□□□ 0.48
TMX2-CTNND1H3BSU7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TMX2-CTNND1H3BSU7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 AL023284.2-201ENST00000405850 579 ntBASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 AC011498.5-201ENST00000592027 486 ntBASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 KRT8P3-201ENST00000519669 1449 ntBASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TMX2-CTNND1H3BSU7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 AC068880.1-201ENST00000507289 2297 ntBASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 GPAT2P1-201ENST00000444924 1672 ntBASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.04■□□□□ 0.48
TMX2-CTNND1H3BSU7 TSSC2-201ENST00000450217 709 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms