Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRABD2BA6NFA1 KRT8P3-201ENST00000519669 1449 ntBASIC17.69■□□□□ 0.42
TRABD2BA6NFA1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRABD2BA6NFA1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRABD2BA6NFA1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TRABD2BA6NFA1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRABD2BA6NFA1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRABD2BA6NFA1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRABD2BA6NFA1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 ZNF815P-204ENST00000434898 1737 ntBASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 MINOS1P3-201ENST00000457048 203 ntBASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 RN7SL606P-201ENST00000472779 293 ntBASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 TNXA-203ENST00000507684 2038 ntBASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 KRT8P7-201ENST00000533003 1432 ntBASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRABD2BA6NFA1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 AC243591.1-201ENST00000452967 1364 ntBASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 AL158211.5-201ENST00000623583 2518 ntBASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 HMGN1P19-201ENST00000436976 333 ntBASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 AP005901.3-202ENST00000581653 237 ntBASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 AL691403.2-201ENST00000618460 490 ntBASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 AC004408.2-201ENST00000623613 2777 ntBASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRABD2BA6NFA1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 IGHGP-201ENST00000390555 1178 ntBASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 POM121L3P-201ENST00000419331 1163 ntBASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 AC073648.2-201ENST00000510116 352 ntBASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 LINC02084-201ENST00000606069 1096 ntBASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRABD2BA6NFA1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms