Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MEIS3P1A6NDR6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
MEIS3P1A6NDR6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MEIS3P1A6NDR6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MEIS3P1A6NDR6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MEIS3P1A6NDR6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 AL357033.4-201ENST00000617703 1807 ntBASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 MIR663A-201ENST00000385250 93 ntBASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 AC091874.3-201ENST00000512672 1195 ntBASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 AC120498.8-201ENST00000614275 531 ntBASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 AL121829.2-201ENST00000620908 328 ntBASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 AC108860.2-201ENST00000562760 2183 ntBASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MEIS3P1A6NDR6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 MYC-208ENST00000641036 567 ntBASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 PP12613-201ENST00000424958 2230 ntBASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 FER1L4-210ENST00000615531 5998 ntBASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MEIS3P1A6NDR6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 AC112777.1-201ENST00000540175 1423 ntBASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 SIRPAP1-201ENST00000448467 1770 ntBASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MEIS3P1A6NDR6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms