Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 CR769767.2-201ENST00000622735 460 ntBASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTPDC1A2A3K4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 KRT18P41-201ENST00000518924 1277 ntBASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 NEK4P2-201ENST00000580004 1012 ntBASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPDC1A2A3K4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 KRT18P38-201ENST00000449496 1282 ntBASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 GCSHP2-201ENST00000560971 527 ntBASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 AC091076.1-201ENST00000610741 619 ntBASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 MYLKP1-201ENST00000509077 1580 ntBASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.65■■□□□ 1.06
PTPDC1A2A3K4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTPDC1A2A3K4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTPDC1A2A3K4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PTPDC1A2A3K4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PTPDC1A2A3K4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PTPDC1A2A3K4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.64■■□□□ 1.06
PTPDC1A2A3K4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 AL671277.2-201ENST00000458060 996 ntBASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPDC1A2A3K4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms