Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 RPS2P4-201ENST00000476944 856 ntBASIC18.46■□□□□ 0.55
CCDC189A1A4V9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 CKBP1-201ENST00000565489 1086 ntBASIC18.46■□□□□ 0.55
CCDC189A1A4V9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 AC130371.2-201ENST00000619443 611 ntBASIC18.46■□□□□ 0.55
CCDC189A1A4V9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 AC112777.1-201ENST00000540175 1423 ntBASIC18.46■□□□□ 0.55
CCDC189A1A4V9 AL135905.2-201ENST00000584934 1404 ntBASIC18.46■□□□□ 0.55
CCDC189A1A4V9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.46■□□□□ 0.55
CCDC189A1A4V9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC189A1A4V9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC189A1A4V9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC189A1A4V9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.45■□□□□ 0.54
CCDC189A1A4V9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 CD99P1-205ENST00000527459 561 ntBASIC18.45■□□□□ 0.54
CCDC189A1A4V9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 AF186192.3-201ENST00000583427 947 ntBASIC18.45■□□□□ 0.54
CCDC189A1A4V9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.45■□□□□ 0.54
CCDC189A1A4V9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 SIRPAP1-201ENST00000448467 1770 ntBASIC18.45■□□□□ 0.54
CCDC189A1A4V9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC189A1A4V9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 FLJ38576-201ENST00000623820 2459 ntBASIC18.44■□□□□ 0.54
CCDC189A1A4V9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC189A1A4V9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms