Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.57■□□□□ 0.56
TCRBV9S1A1TA0A576 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV9S1A1TA0A576 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TCRBV9S1A1TA0A576 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV9S1A1TA0A576 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.57■□□□□ 0.56
TCRBV9S1A1TA0A576 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV9S1A1TA0A576 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV9S1A1TA0A576 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.57■□□□□ 0.56
TCRBV9S1A1TA0A576 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV9S1A1TA0A576 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV9S1A1TA0A576 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 FAM197Y1-201ENST00000421178 764 ntBASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TCRBV9S1A1TA0A576 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV9S1A1TA0A576 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 MFAP1P1-201ENST00000442257 1255 ntBASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 CD99P1-205ENST00000527459 561 ntBASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
TCRBV9S1A1TA0A576 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 SDHAP2-201ENST00000455183 2001 ntBASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.52■□□□□ 0.56
TCRBV9S1A1TA0A576 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms