Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 MED15P5-201ENST00000423150 992 ntBASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 AC140113.2-201ENST00000604370 208 ntBASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC163A0A0D9SF12 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 AC034105.1-201ENST00000563488 319 ntBASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 AC083906.6-201ENST00000641366 219 ntBASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 AC079781.4-201ENST00000641908 219 ntBASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC163A0A0D9SF12 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 AC009102.3-201ENST00000623118 1491 ntBASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 AC098831.1-202ENST00000438821 336 ntBASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 DNAJB3-201ENST00000446806 729 ntBASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 AL356488.2-201ENST00000602755 427 ntBASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 Z83851.2-201ENST00000609564 659 ntBASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC163A0A0D9SF12 AL356309.3-201ENST00000624132 1934 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 AC125634.1-201ENST00000438758 1403 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 RPSAP43-201ENST00000402237 625 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 MTCL1P1-201ENST00000446207 792 ntBASIC18.15■□□□□ 0.5
CCDC163A0A0D9SF12 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms