Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 NUDT16P1-203ENST00000513809 620 ntBASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 AC139713.2-201ENST00000641328 2723 ntBASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV5-3A0A0A0MS03 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 SLC25A1P4-201ENST00000567977 778 ntBASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 PP12613-201ENST00000424958 2230 ntBASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRBV5-3A0A0A0MS03 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 LINC01126-201ENST00000623515 1646 ntBASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-3A0A0A0MS03 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 AL135905.2-201ENST00000584934 1404 ntBASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRBV5-3A0A0A0MS03 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms