Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC187A0A096LP49 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 MIR574-201ENST00000385209 96 ntBASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 AC008608.2-201ENST00000606089 416 ntBASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC187A0A096LP49 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 AC125437.2-201ENST00000625180 2167 ntBASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 KRT18P13-201ENST00000400056 1290 ntBASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 AC113404.2-201ENST00000507884 177 ntBASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC187A0A096LP49 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC187A0A096LP49 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC187A0A096LP49 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC187A0A096LP49 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC187A0A096LP49 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 MIR149-201ENST00000384879 89 ntBASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 AC132008.2-207ENST00000454517 770 ntBASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 KRT18P58-201ENST00000527480 1120 ntBASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC187A0A096LP49 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms