Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
PCDHA11Q9Y5I1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.35■■□□□ 1.97
PCDHA11Q9Y5I1 SMPD5-203ENST00000639008 1464 ntBASIC27.35■■□□□ 1.97
PCDHA11Q9Y5I1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA11Q9Y5I1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
PCDHA11Q9Y5I1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
PCDHA11Q9Y5I1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA11Q9Y5I1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA11Q9Y5I1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA11Q9Y5I1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
PCDHA11Q9Y5I1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA11Q9Y5I1 AC026202.3-201ENST00000600805 1127 ntBASIC27.33■■□□□ 1.97
PCDHA11Q9Y5I1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA11Q9Y5I1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA11Q9Y5I1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA11Q9Y5I1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA11Q9Y5I1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.32■■□□□ 1.96
PCDHA11Q9Y5I1 BHLHE23-202ENST00000612929 1109 ntBASIC27.32■■□□□ 1.96
PCDHA11Q9Y5I1 AC074183.2-201ENST00000623112 922 ntBASIC27.32■■□□□ 1.96
PCDHA11Q9Y5I1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.32■■□□□ 1.96
PCDHA11Q9Y5I1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA11Q9Y5I1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.32■■□□□ 1.96
PCDHA11Q9Y5I1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.31■■□□□ 1.96
PCDHA11Q9Y5I1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA11Q9Y5I1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA11Q9Y5I1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.3■■□□□ 1.96
PCDHA11Q9Y5I1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA11Q9Y5I1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHA11Q9Y5I1 DUX4L9-201ENST00000449051 1259 ntBASIC27.29■■□□□ 1.96
PCDHA11Q9Y5I1 RP9P-202ENST00000450133 1212 ntBASIC27.29■■□□□ 1.96
PCDHA11Q9Y5I1 AC009299.2-201ENST00000482477 511 ntBASIC27.29■■□□□ 1.96
PCDHA11Q9Y5I1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA11Q9Y5I1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA11Q9Y5I1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
PCDHA11Q9Y5I1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.28■■□□□ 1.96
PCDHA11Q9Y5I1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.28■■□□□ 1.96
PCDHA11Q9Y5I1 AC010980.1-201ENST00000587192 1142 ntBASIC27.28■■□□□ 1.96
PCDHA11Q9Y5I1 AC131212.1-201ENST00000613771 668 ntBASIC27.28■■□□□ 1.96
PCDHA11Q9Y5I1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
PCDHA11Q9Y5I1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHA11Q9Y5I1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA11Q9Y5I1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA11Q9Y5I1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA11Q9Y5I1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHA11Q9Y5I1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
PCDHA11Q9Y5I1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA11Q9Y5I1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
PCDHA11Q9Y5I1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA11Q9Y5I1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.26■■□□□ 1.95
PCDHA11Q9Y5I1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.26■■□□□ 1.95
PCDHA11Q9Y5I1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA11Q9Y5I1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA11Q9Y5I1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA11Q9Y5I1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA11Q9Y5I1 KRT8P33-201ENST00000508125 1423 ntBASIC27.25■■□□□ 1.95
PCDHA11Q9Y5I1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
PCDHA11Q9Y5I1 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA11Q9Y5I1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
PCDHA11Q9Y5I1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA11Q9Y5I1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
PCDHA11Q9Y5I1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA11Q9Y5I1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA11Q9Y5I1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA11Q9Y5I1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
PCDHA11Q9Y5I1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA11Q9Y5I1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA11Q9Y5I1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA11Q9Y5I1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA11Q9Y5I1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.22■■□□□ 1.95
PCDHA11Q9Y5I1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 AL135925.1-201ENST00000605920 1701 ntBASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 ABCB10P3-201ENST00000561950 2166 ntBASIC27.21■■□□□ 1.95
PCDHA11Q9Y5I1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCDHA11Q9Y5I1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHA11Q9Y5I1 YBX1P4-201ENST00000392794 808 ntBASIC27.2■■□□□ 1.94
PCDHA11Q9Y5I1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.2■■□□□ 1.94
PCDHA11Q9Y5I1 AC025884.2-201ENST00000553429 711 ntBASIC27.2■■□□□ 1.94
PCDHA11Q9Y5I1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA11Q9Y5I1 THA1P-201ENST00000590384 1145 ntBASIC27.19■■□□□ 1.94
PCDHA11Q9Y5I1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA11Q9Y5I1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.19■■□□□ 1.94
PCDHA11Q9Y5I1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDHA11Q9Y5I1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHA11Q9Y5I1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 GUSBP5-201ENST00000418136 578 ntBASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 AC139795.1-202ENST00000500444 432 ntBASIC27.17■■□□□ 1.94
PCDHA11Q9Y5I1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms