Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.13■□□□□ 0.65
NOTCH3Q9UM47 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH3Q9UM47 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.13■□□□□ 0.65
NOTCH3Q9UM47 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.12■□□□□ 0.65
NOTCH3Q9UM47 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NOTCH3Q9UM47 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NOTCH3Q9UM47 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NOTCH3Q9UM47 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.11■□□□□ 0.65
NOTCH3Q9UM47 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NOTCH3Q9UM47 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.1■□□□□ 0.65
NOTCH3Q9UM47 DUX4L18-201ENST00000553347 1267 ntBASIC19.1■□□□□ 0.65
NOTCH3Q9UM47 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NOTCH3Q9UM47 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NOTCH3Q9UM47 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NOTCH3Q9UM47 AC007029.1-201ENST00000604183 313 ntBASIC19.09■□□□□ 0.65
NOTCH3Q9UM47 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.09■□□□□ 0.65
NOTCH3Q9UM47 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NOTCH3Q9UM47 AC126177.7-201ENST00000547904 679 ntBASIC19.09■□□□□ 0.65
NOTCH3Q9UM47 AC009831.1-201ENST00000580420 1582 ntBASIC19.09■□□□□ 0.65
NOTCH3Q9UM47 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NOTCH3Q9UM47 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.08■□□□□ 0.65
NOTCH3Q9UM47 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NOTCH3Q9UM47 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NOTCH3Q9UM47 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.08■□□□□ 0.65
NOTCH3Q9UM47 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.08■□□□□ 0.65
NOTCH3Q9UM47 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NOTCH3Q9UM47 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NOTCH3Q9UM47 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NOTCH3Q9UM47 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NOTCH3Q9UM47 AL359258.2-201ENST00000564063 1566 ntBASIC19.08■□□□□ 0.64
NOTCH3Q9UM47 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NOTCH3Q9UM47 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
NOTCH3Q9UM47 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NOTCH3Q9UM47 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NOTCH3Q9UM47 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.07■□□□□ 0.64
NOTCH3Q9UM47 ST7-AS1-201ENST00000456775 1889 ntBASIC19.07■□□□□ 0.64
NOTCH3Q9UM47 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
NOTCH3Q9UM47 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
NOTCH3Q9UM47 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 DUX4L9-201ENST00000449051 1259 ntBASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 AC009299.2-201ENST00000482477 511 ntBASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 AC025884.2-201ENST00000553429 711 ntBASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.05■□□□□ 0.64
NOTCH3Q9UM47 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NOTCH3Q9UM47 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.04■□□□□ 0.64
NOTCH3Q9UM47 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NOTCH3Q9UM47 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NOTCH3Q9UM47 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.03■□□□□ 0.64
NOTCH3Q9UM47 AC093536.1-201ENST00000569153 554 ntBASIC19.03■□□□□ 0.64
NOTCH3Q9UM47 AC100797.4-201ENST00000631653 1827 ntBASIC19.03■□□□□ 0.64
NOTCH3Q9UM47 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NOTCH3Q9UM47 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NOTCH3Q9UM47 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NOTCH3Q9UM47 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NOTCH3Q9UM47 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NOTCH3Q9UM47 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NOTCH3Q9UM47 AL592293.1-201ENST00000502889 1188 ntBASIC19.02■□□□□ 0.64
NOTCH3Q9UM47 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NOTCH3Q9UM47 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NOTCH3Q9UM47 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NOTCH3Q9UM47 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NOTCH3Q9UM47 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19■□□□□ 0.63
NOTCH3Q9UM47 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NOTCH3Q9UM47 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NOTCH3Q9UM47 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NOTCH3Q9UM47 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
NOTCH3Q9UM47 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19■□□□□ 0.63
NOTCH3Q9UM47 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.99■□□□□ 0.63
NOTCH3Q9UM47 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NOTCH3Q9UM47 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NOTCH3Q9UM47 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NOTCH3Q9UM47 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NOTCH3Q9UM47 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOTCH3Q9UM47 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.98■□□□□ 0.63
NOTCH3Q9UM47 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.98■□□□□ 0.63
NOTCH3Q9UM47 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NOTCH3Q9UM47 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms